DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and SMARCAD1

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001121901.1 Gene:SMARCAD1 / 56916 HGNCID:18398 Length:1028 Species:Homo sapiens


Alignment Length:622 Identity:210/622 - (33%)
Similarity:318/622 - (51%) Gaps:102/622 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1299 LVQLMPLD---------GKTEQLKSDPLQARKT--RDREFLDYLFNP-KSIPN------------ 1339
            :.:|.|.:         .||..|..|.:...||  ::|:.:..|.|. :.|.|            
Human   415 ITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGN 479

  Fly  1340 ---YKVPVPI----SVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQ 1397
               :.:..|.    |:.|:.||:.|:|||..::|:.|:|||.|:||||||:|.|..||  ::: |
Human   480 GGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLA--YLY-Q 541

  Fly  1398 TANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTK---CNLVV 1459
            ..|  |.|.|::.|.:...:|:.||..:.   ..|:.|.|||....|:::|.:|.::   .|::|
Human   542 EGN--NGPHLIVVPASTIDNWLREVNLWC---PTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIV 601

  Fly  1460 ASYD---TVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLE 1521
            .:|:   :...|...|..:..||.:.||||::||..:...:.:..:.||:||:|:|||:|||:||
Human   602 TTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 666

  Fly  1522 LWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVL-PFLLRRVKE 1585
            |.||.:|:||....:....::|    :.||:  ..||.||........|..:|:: ||:||||||
Human   667 LMSLLNFVMPHMFSSSTSEIRR----MFSSK--TKSADEQSIYEKERIAHAKQIIKPFILRRVKE 725

  Fly  1586 DVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALR 1650
            :|||.||||..:..||.:|..|.:||....|: ||..::.|        |||.   .|.:...:.
Human   726 EVLKQLPPKKDRIELCAMSEKQEQLYLGLFNR-LKKSINNL--------VTEK---NTEMCNVMM 778

  Fly  1651 YLQNVCNHPKLVLRQ--SEELTKVTSQLAL-------SNSSL--DDIE---------------HS 1689
            .|:.:.||| |:.||  :.|..|..|||.|       :|..|  :|:|               |.
Human   779 QLRKMANHP-LLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHI 842

  Fly  1690 AKLPALKQLLLDCG----IGVQTESVSQ--HRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDG 1748
            ........|:||.|    :|.....:.|  .|.::|.|...||||:|. ||:.|  ...||||||
Human   843 NNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEV-LLKHH--QHRYLRLDG 904

  Fly  1749 SVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIG 1813
            ....|:|..:::.||:|..|.|.||:|..||||:|||.|:.||..:.|.||..|.||.||.||:|
Human   905 KTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 969

  Fly  1814 QKKVVNVYRLITRNSLEEKIMGL--QKFKILTANTVV 1848
            |.|.|.|.:||::.::||.::.:  ||.|:....|.|
Human   970 QTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTV 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 197/552 (36%)
SMARCAD1NP_001121901.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..251
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..328
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..373
HepA <496..999 CDD:440319 192/532 (36%)
DEGH box 628..631 2/2 (100%)
Nuclear localization signal. /evidence=ECO:0000255 721..738 12/16 (75%)
DEGD box 1007..1010 210/622 (34%)
Blue background indicates that the domain is not in the aligned region.

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