DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and rad54l2

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:XP_005174062.1 Gene:rad54l2 / 558947 ZFINID:ZDB-GENE-030131-3097 Length:1455 Species:Danio rerio


Alignment Length:627 Identity:177/627 - (28%)
Similarity:269/627 - (42%) Gaps:141/627 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1353 YQQAGINWLW-----FLNKYNLHG----ILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLV 1408
            :|..||.:|:     .|.:|....    ||...||||||||.|..:  |.:.|.|....   .|.
Zfish   302 HQIGGIRFLYDNLVESLERYKTSSGFGCILAHSMGLGKTLQVISFI--DVLLRHTGAKT---VLA 361

  Fly  1409 ICPPTLTGHWVYEVEKFLDQGSVLRP-------------LHY----YGFPVGREKLRSDIGTKCN 1456
            |.|.....:|:.|...:|.....|.|             :|.    :...|.|.|:..|......
Zfish   362 IVPVNTLQNWLAEFNLWLPAAEALPPDTDPQQVLPRTFKVHILNDEHKTTVARAKVVEDWTGDGG 426

  Fly  1457 LVVASYD------------TVRK------------DID-------FFSGIHF-------NYCVLD 1483
            :::..|:            |.||            |:|       ....|..       :..:.|
Zfish   427 VLLMGYEMYRLLSLKKSFVTGRKRKSKKPAGPVIIDLDEEDRQQELMKAIERALSRPGPDVVICD 491

  Fly  1484 EGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPI 1548
            |||.|||....:|:|:|.:::..|::|:|.|:|||::|.|.:.||:.|.||||.::|...|.|||
Zfish   492 EGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPI 556

  Fly  1549 LSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLK-DLPPKITQDLLCELSPLQLRLYE 1612
            |:.:...|:.::.:........||..:..|:.|| ..|||: .||||....:|..||.||..||.
Zfish   557 LNGQCIDSTPQDVQLMRYRSHVLHSLLEGFVQRR-GHDVLRHQLPPKEEHVILVRLSRLQRALYT 620

  Fly  1613 DFSNKH-------------LKD----C-------------------------LDKLGDSSSASMV 1635
            :|.|:.             ||.    |                         ||.|..||.....
Zfish   621 EFMNRFREAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDLDDLNSSSGTRCS 685

  Fly  1636 TENLSAKTHIFQALRYLQNVCNH-PKLVLRQSEELTKVTSQLALSNSSLDDIEHSAKLPALKQLL 1699
            ...:.:||.  .|....|....| ..|..:.::.:|...::..::|.....:|:|||:..|..|:
Zfish   686 APGIKSKTS--DAANSRQMSVGHLNPLQEKANQVITYEWAKEVMTNYQTGVLENSAKMVLLFYLI 748

  Fly  1700 LDCGIGVQTESVSQ-HRALIFCQLKAMLDIVEQDLLRRHLP------------SVTYLRLDGSVP 1751
                    .|:|:: .:.|:|.|..:.|.::|..|.||.:|            ::.|.|||||..
Zfish   749 --------DETVARGDKILVFSQSLSTLTVIEDFLSRRPMPIQTETGTHNWVRNINYYRLDGSTS 805

  Fly  1752 ASQRQDIVNNFNSDPSID---VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIG 1813
            ||:|:.::|.|| ||:..   |.||:|..|.||:||.||:.|:..:..|||..|.||:.|.:|.|
Zfish   806 ASERERLINQFN-DPANTQAWVFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYG 869

  Fly  1814 QKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASL 1855
            |:|..::|||:...:||:||...|..|...::.||...|..|
Zfish   870 QRKPCHIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLNPVL 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 174/619 (28%)
rad54l2XP_005174062.1 HepA <203..905 CDD:440319 174/619 (28%)
DEXHc_ARIP4 299..575 CDD:350827 73/277 (26%)
PHA03378 <929..1179 CDD:223065
Blue background indicates that the domain is not in the aligned region.

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