DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel89B and chd5

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:XP_073772935.1 Gene:chd5 / 553422 ZFINID:ZDB-GENE-120314-2 Length:2053 Species:Danio rerio


Alignment Length:550 Identity:167/550 - (30%)
Similarity:262/550 - (47%) Gaps:83/550 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1350 LRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTL 1414
            |..||..|:|||.|........||.|:||||||:|||..|...:....:..    |.||..|.:.
Zfish   736 LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKG----PFLVSAPLST 796

  Fly  1415 TGHWVYEVEKFL------------DQGSVLRPLHY----YGFPVGRE--KLRSDIGTKCNLVVAS 1461
            ..:|..|.|.:.            :..:::|...:    .....||:  :::.|...|.::::.|
Zfish   797 IINWEREFEMWAPDFYVVTYTGDKESRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTS 861

  Fly  1462 YDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLF 1526
            |:.:..|......|.:...|:||.|.:||.::|..:.:...|..::|:|:|||:|||:.||:.|.
Zfish   862 YELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLL 926

  Fly  1527 DFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDL 1591
            :||.|......:.|::.|:          ..:||.:     ::.||..:.|.:|||:|.||.|::
Zfish   927 NFLTPERFNNLEGFLEEFA----------DISKEDQ-----IKKLHDLLGPHMLRRLKADVFKNM 976

  Fly  1592 PPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVC 1656
            |.|....:..||||:|.:.|:....::. :.|:..|..:..|::           ..:..|:..|
Zfish   977 PAKTELIVRVELSPMQKKYYKFILTRNF-EALNSKGGGNQVSLL-----------NIMMDLKKCC 1029

  Fly  1657 NHPKLVLRQSEELTKVTSQLALSNSSLDD---IEHSAKLPALKQLLLDCGIGVQTESVSQHRALI 1718
            |||.|....:.|..      .|.|.|.|.   ::.|.||..|:::|:....|       .||.||
Zfish  1030 NHPYLFPVAAVEAP------VLPNGSYDGNLLVKSSGKLTLLQKMLIKLKDG-------GHRVLI 1081

  Fly  1719 FCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSID--VLLLTTMVGGLG 1781
            |.|:..|||::|..|   ......|.|:||.:....||:.::.||: |...  ..||:|..||||
Zfish  1082 FSQMTKMLDLLEDFL---EFEGYKYERIDGGITGGLRQEAIDRFNA-PGAQQFCFLLSTRAGGLG 1142

  Fly  1782 LNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANT 1846
            :||..|||||..:.||||..|:||..|||||||.|.|.:||.:||.|:||:|..:.|.|::..:.
Zfish  1143 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1207

  Fly  1847 VV------------SAENASLQTMGTSQIF 1864
            ||            ..|...:...||.::|
Zfish  1208 VVRPGLGSKTGSMSKQELDDILKFGTEELF 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 163/533 (31%)
chd5XP_073772935.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.