DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and Etl1

DIOPT Version :9

Sequence 1:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster


Alignment Length:882 Identity:226/882 - (25%)
Similarity:367/882 - (41%) Gaps:239/882 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1042 TLALQQTVTTTNTRSGAG-----------GATTPTATT--APRGPGRPPTGEILSATNATAHIEL 1093
            |:|:|::::.||....|.           |...|.|.:  .||..|       :|..|.:.:   
  Fly    97 TMAIQESLSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLKPRSNG-------ISGGNFSDN--- 151

  Fly  1094 KAQQAKEAEAKQCRIQRLGAACA-IEKLCRIFGEQIIEKVAVFQHLMFGKVEQFVKEAYDWRLGS 1157
              ..:.:.:.||.:.|...:..: .|...::.|::             .||.||:.||      |
  Fly   152 --DHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQR-------------KKVFQFMNEA------S 195

  Fly  1158 LLPDLGVCNELVSSMQLIETAAPHLHVALHPQMFALLPSLGFIVCHPLKAVRHMAARCIAVLAEI 1222
            |:       ||.|...|.|..|                 |..|...|......:..:..::....
  Fly   196 LI-------ELQSVKTLSEKKA-----------------LAIIDVRPFSDWSDLRQKLESIRMSG 236

  Fly  1223 DACQTMQFVVHDLLPLLGKIEQLIERQGAIEAI----ERVVSRLQIKVVPYIVLLVVPLLGAMSD 1283
            |              ||...::||.:|..:.||    ..:||||: |.:..         ||   
  Fly   237 D--------------LLNYAQELINKQNTVAAILSKCNNMVSRLE-KAISN---------GA--- 274

  Fly  1284 PDESVRLLSTHCFANLVQLMPLDGKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPISV 1348
                                   |..||                      ||.:.:       .:
  Fly   275 -----------------------GIVEQ----------------------PKLLSS-------GL 287

  Fly  1349 ELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPT 1413
            :|..||..|:|||..::|..::|||.|:||||||:|.|..||    :.:...|:....|::.|.:
  Fly   288 QLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLA----YLKENGLSQAAHLIVVPSS 348

  Fly  1414 LTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLR----SDIGTKCNLVVASYDTV------RKD 1468
            ...:|..|:.::..:..|.:   |:|....|.::|    .|..|..::::.:|..|      || 
  Fly   349 TLDNWEAEISRWCPELVVEK---YHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERK- 409

  Fly  1469 IDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGF 1533
              .|.....:|.:.||.|::||..|:....:..:.|..|::|:|||:|||:|||.||..|:||.|
  Fly   410 --MFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKF 472

  Fly  1534 LGTEKQFVQR-FSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQ 1597
            .....:.::. |::...|..|....::.||..:   :...|.:.||:|||:|:||||:||.|:: 
  Fly   473 FAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQI---QRAKRIMKPFVLRRLKKDVLKNLPKKLS- 533

  Fly  1598 DLLCELSPL--QLRLY-----EDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNV 1655
              |.|..|:  |.::|     :.:||...:.|      |||.       .|...|...:|   .:
  Fly   534 --LVEKVPMSSQQKIYYHELVDYYSNNKGEVC------SSSE-------RAGIAIMMEMR---RI 580

  Fly  1656 CNHPKLV---------------LRQSEELTKVTSQLALSN-SSLDDIE----------HSAKLPA 1694
            .|||.|:               |..:....|...|..... :.:.|.:          :..|:| 
  Fly   581 ANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIP- 644

  Fly  1695 LKQLLLDCGIGVQTESV------SQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPAS 1753
             ..|:.|.|..:..:::      ..||.|:|.|...||||||:.|   .:....:.||||:...:
  Fly   645 -DNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYL---RIRKFGFCRLDGATAVN 705

  Fly  1754 QRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVV 1818
            .|||::.:||.|.||.|.||:|..||:|:|||.|||.:..:.|:||..|.||.||.||:||::.|
  Fly   706 VRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPV 770

  Fly  1819 NVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASL 1855
            .:||||:.:::||.|:...:.|:.....:.|.|...:
  Fly   771 TIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874 19/109 (17%)
HEAT repeat 1234..1261 CDD:293787 8/30 (27%)
HEAT repeat 1269..1298 CDD:293787 2/28 (7%)
SNF2_N 1353..1662 CDD:278600 99/326 (30%)
DEXDc 1370..1514 CDD:238005 42/153 (27%)
Helicase_C 1689..1813 CDD:278689 52/129 (40%)
Etl1NP_609320.2 SNF2_N 292..587 CDD:278600 99/326 (30%)
DEXDc 308..453 CDD:238005 42/154 (27%)
Helicase_C 651..765 CDD:278689 48/116 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467149
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10799
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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