DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and atrx

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:XP_021336651.2 Gene:atrx / 323299 ZFINID:ZDB-GENE-030912-11 Length:2053 Species:Danio rerio


Alignment Length:674 Identity:163/674 - (24%)
Similarity:258/674 - (38%) Gaps:207/674 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1349 ELRCYQQAGINWLW--------FLNKYNLHG-ILCDDMGLGKTLQTICILAGDHMHRQTANLANL 1404
            :|:.:|..|:.::|        .:.|....| ||...||||||||.:.:|   |.......|...
Zfish  1153 KLKPHQVDGVQFMWDCCCESVRKVEKSAGSGCILAHCMGLGKTLQVVTLL---HTVLLCEKLNFS 1214

  Fly  1405 PSLVICPPTLTGHWVYEVEKF------------LDQGSVLRPLH--------------------- 1436
            .:||:||.....:|:.|.||:            .:..:|.||..                     
Zfish  1215 TALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERAYALQRWQEDGGVMIMGYEM 1279

  Fly  1437 YYGFPVGR----EKLRSDIGTKCNLVVASYDTVRKD-IDFFSGIHFNYCVLDEGHIIKNGKTKSS 1496
            |.....||    :||:              :|.:|. :|  .|..|..|  ||||::||..:..|
Zfish  1280 YRNLTQGRNIKSKKLK--------------ETFQKTLVD--PGPDFVIC--DEGHVLKNEASAVS 1326

  Fly  1497 KAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQ 1561
            ||:..:|...|::|:|||:|||::|...:.:|:....||:.|:|..||..||.:.:.|.|:..:.
Zfish  1327 KAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLVDV 1391

  Fly  1562 EAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKL 1626
            .........|:..:...:.||....:.|.||||....|...|||:|.:||..:        ||..
Zfish  1392 RVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLSPIQCKLYRYY--------LDHF 1448

  Fly  1627 GDSSSASMVTENLSAKTHIFQALRYLQNVCNHP----------------------KLVLRQSEEL 1669
            ....|| :.:....|.|.:||..:.|..:..||                      :.:..::||.
Zfish  1449 TGVGSA-LESGKGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEES 1512

  Fly  1670 T-KVTSQ---------------LALSNSSLDDIE------------------------------- 1687
            : .:||:               .:...|..||:|                               
Zfish  1513 SMSLTSEDEKPKRKKKRGRGKDQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRPSNS 1577

  Fly  1688 -----------------------HSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIV 1729
                                   ||.|:..|.::|.      ..|.|.. :.|:|.|....||::
Zfish  1578 GPGSPSPEWYKEFVSEEDAEVLTHSGKMVLLFEILR------LAEEVDD-KVLVFSQSLISLDLI 1635

  Fly  1730 EQDLLR------------------RHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSI--DVLLLT 1774
            | |.|.                  :...::.|.|||||..|..|:....:||...::  .:.|::
Zfish  1636 E-DFLELAGRAKEEGKESPYKGEGKWFRNIDYYRLDGSTNALTRKKWAEDFNDISNVRGRLFLIS 1699

  Fly  1775 TMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKF 1839
            |..|.||:||..|:.||..:..|||..|:|::.|.:|.||.|.|.|||.:.:.::||||...|  
Zfish  1700 TRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKTVYVYRFLAQGTMEEKIYDRQ-- 1762

  Fly  1840 KILTANTVVSAENASLQTMGTSQI 1863
                    |:.::.|.:.:...||
Zfish  1763 --------VAKQSLSFRVVDQQQI 1778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 159/658 (24%)
atrxXP_021336651.2 None
Blue background indicates that the domain is not in the aligned region.

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