DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and Chd7

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001264078.1 Gene:Chd7 / 320790 MGIID:2444748 Length:2986 Species:Mus musculus


Alignment Length:674 Identity:200/674 - (29%)
Similarity:309/674 - (45%) Gaps:125/674 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1301 QLMPLDGKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLN 1365
            :||..:.:||:::..|....| :.....:|..|.|              ||.||..|:|||.| |
Mouse   924 KLMSREPETERVERPPADDWK-KSESSREYKNNNK--------------LREYQLEGVNWLLF-N 972

  Fly  1366 KYNLHG-ILCDDMGLGKTLQTICI-----LAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEK 1424
            .||:.. ||.|:||||||:|:|..     |.|.|.          |.|||.|.:...:|..|...
Mouse   973 WYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHG----------PFLVIAPLSTIPNWEREFRT 1027

  Fly  1425 FLDQGSVLRPLHYYGFPVGREKL------------RSDIGT-KCNLVVASYDTVRKDIDFFSGIH 1476
            :.:...|:    |:|....|..:            |...|: |.:.::.:::.:..|......|.
Mouse  1028 WTELNVVV----YHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIP 1088

  Fly  1477 FNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFV 1541
            :...|:||.|.:||...|..:.:|.:...|:::|:|||:||.|.||:||..||.|....:|..|:
Mouse  1089 WRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFM 1153

  Fly  1542 QRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPL 1606
            |.|.       |.|:..:.|:     ::|:   :.|.:|||:||||.|:|.||....:..||:.:
Mouse  1154 QEFG-------DLKTEEQVQK-----LQAI---LKPMMLRRLKEDVEKNLAPKEETIIEVELTNI 1203

  Fly  1607 QLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTK 1671
            |.:.|.....|:. ..|.|.|..::.          .::...:..|:..||||.|:....|::.:
Mouse  1204 QKKYYRAILEKNF-TFLSKGGGQANV----------PNLLNTMMELRKCCNHPYLINGAEEKILE 1257

  Fly  1672 VTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRR 1736
            ...:  ..|:...|.:..|.:.|..:|:|...: :.......||.|||.|:...|||:|..|::|
Mouse  1258 EFKE--THNAESPDFQLQAMIQAAGKLVLIDKL-LPKLKAGGHRVLIFSQMVRCLDILEDYLIQR 1319

  Fly  1737 HLPSVTYLRLDGSVPASQRQDIVNNFNSDPSID--VLLLTTMVGGLGLNLTGADTVIFVEHDWNP 1799
            ..|   |.|:||.|..:.||..::.| |.|..|  |.||.|..||||:|||.|||.|..:.||||
Mouse  1320 RYP---YERIDGRVRGNLRQAAIDRF-SKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1380

  Fly  1800 MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSA----ENAS--LQTM 1858
            ..||||..|.|||||.|.|.:||||||||.|.::......|:.....|:.:    |||:  :|.:
Mouse  1381 QNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQL 1445

  Fly  1859 GTSQIFDLFNGG--------KDKGAE-----------------------SGSSAVQGT--ASGGM 1890
            ...:|.||...|        :|:|::                       .||:..:.:  |||..
Mouse  1446 SKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNR 1510

  Fly  1891 SMNTIIENLPELWSEHQYEEEYDL 1914
            :..::.:  |..|.:...:.|.|:
Mouse  1511 TDISLDD--PNFWQKWAKKAELDI 1532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 172/527 (33%)
Chd7NP_001264078.1 Glutenin_hmw <23..553 CDD:367362
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..146
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..180
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..246
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..307
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..412
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..792
CD1_tandem_CHD5-9_like 786..850 CDD:349315
CD2_tandem_CHD5-9_like 869..926 CDD:349310 0/1 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 928..949 4/21 (19%)
PLN03142 957..>1556 CDD:215601 192/640 (30%)
DEAH box 1095..1098 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1566..1590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1826..1851
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2151..2274
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2366..2393
BRK 2552..2593 CDD:462196
BRK 2631..2675 CDD:197800
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2812..2861
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2924..2986
Blue background indicates that the domain is not in the aligned region.

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