Sequence 1: | NP_001287351.1 | Gene: | Hel89B / 41943 | FlyBaseID: | FBgn0022787 | Length: | 1923 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258119.1 | Gene: | Smarca1 / 317575 | RGDID: | 1561046 | Length: | 1062 | Species: | Rattus norvegicus |
Alignment Length: | 779 | Identity: | 235/779 - (30%) |
---|---|---|---|
Similarity: | 350/779 - (44%) | Gaps: | 135/779 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1217 AVLAEIDACQTMQFVVHDLLPLLGKIEQLIERQGAIEAI---------ERVVSRLQIKVV----- 1267
Fly 1268 -------PYIVLLV-VPLLGAMSDPDESVR----LLSTHCFANLVQ-------LMPLDGK--TEQ 1311
Fly 1312 LKSDPLQA---------RKTRDREFLDYLFNPKSIPNYKVPVPISVE------LRCYQQAGINWL 1361
Fly 1362 WFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFL 1426
Fly 1427 DQGSVLRPLHYYGFPVGREKLRSD--IGTKCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIK 1489
Fly 1490 NGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDA 1554
Fly 1555 KSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHL 1619
Fly 1620 KDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLD 1684
Fly 1685 DIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGS 1749
Fly 1750 VPASQRQDIVNNFNS-DPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIG 1813
Fly 1814 QKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVS------------AENASLQTM--GTSQIF 1864
Fly 1865 -------------DLFNGGKDKGAESGSSAVQGTASGGMSMNTIIENLPELWSEHQYEEEYDLG 1915 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hel89B | NP_001287351.1 | HEAT repeat | 5..30 | CDD:293787 | |
HEAT repeat | 42..70 | CDD:293787 | |||
HEAT repeat | 395..420 | CDD:293787 | |||
HEAT repeat | 433..465 | CDD:293787 | |||
HEAT repeat | 475..504 | CDD:293787 | |||
HEAT repeat | 516..540 | CDD:293787 | |||
HEAT repeat | 560..589 | CDD:293787 | |||
DUF3535 | 654..1138 | CDD:288874 | |||
HEAT repeat | 1234..1261 | CDD:293787 | 6/35 (17%) | ||
HEAT repeat | 1269..1298 | CDD:293787 | 9/33 (27%) | ||
SNF2_N | 1353..1662 | CDD:278600 | 106/310 (34%) | ||
DEXDc | 1370..1514 | CDD:238005 | 49/145 (34%) | ||
Helicase_C | 1689..1813 | CDD:278689 | 52/124 (42%) | ||
Smarca1 | NP_001258119.1 | PLN03142 | 64..1061 | CDD:215601 | 222/724 (31%) |
DBINO | <96..114 | CDD:290603 | 5/17 (29%) | ||
DEXDc | 207..346 | CDD:238005 | 49/145 (34%) | ||
Helicase_C | 489..604 | CDD:278689 | 52/124 (42%) | ||
HAND | 750..848 | CDD:286232 | |||
SANT | 851..890 | CDD:238096 | |||
SLIDE | 905..1017 | CDD:286233 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D61251at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |