DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and Hells

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001099841.1 Gene:Hells / 294071 RGDID:1309820 Length:837 Species:Rattus norvegicus


Alignment Length:697 Identity:211/697 - (30%)
Similarity:321/697 - (46%) Gaps:166/697 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1306 DGKTEQLKSDPLQARKTRD-----------REFLDYLFNPKSIPNYKVPVPISVE-------LRC 1352
            :..|..|..:.||..|..:           |:...:.|:|....|.: |||....       :|.
  Rat   161 NSSTTNLCVEDLQKNKDSNSMIKDRLSQTVRQNSKFFFDPVRKCNGQ-PVPFQQPKHFTGGVMRW 224

  Fly  1353 YQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA--------GDHMHRQTANLANLPSLVI 1409
            ||..|:.||..|.:..::|||.|:||||||:|.|..:|        |             |.||.
  Rat   225 YQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPG-------------PFLVC 276

  Fly  1410 CPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTKCN------LVVASYDTVRKD 1468
            .|.:...:|:.|.::|..:   :..|.|:|....|.||..:|..:..      :|:.|::...:|
  Rat   277 GPLSTLPNWMAEFKRFTPE---IPTLLYHGNRQERRKLVKNIHKRQGTLQIHPVVITSFEIAMRD 338

  Fly  1469 IDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGF 1533
            .:.....::.|.::||||.|||.|.:..:.:||..|:::|:|:|||:|||:.|||||.:||:|..
  Rat   339 QNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDV 403

  Fly  1534 LGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPK---I 1595
            ....|.|...|....||.......|||:|..||.|  ||:.:.||||||:|.||..::|||   :
  Rat   404 FDDLKSFESWFDITSLSETAEDIIAKEREQNVLHM--LHQILTPFLLRRLKSDVALEVPPKREVV 466

  Fly  1596 TQDLLC---------------------------ELSP-----------LQLRLYEDFSNKHLKDC 1622
            ....||                           ||||           :.....:.|.::     
  Rat   467 VYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPKRRSRKSINYSELDQFPSE----- 526

  Fly  1623 LDKLGD------SSSASMVTENLSAKTHIFQALR----YLQNVCNHPKLVLRQSEELT---KVTS 1674
            |:||..      ....::|..|:..::.:...|:    .|:..||||.::....:.:|   |:..
  Rat   527 LEKLISQIQPEVKRERTVVEGNIPIESEVNLKLQNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDE 591

  Fly  1675 QLALSNSS----LDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLR 1735
            :| ::||.    ||.:     ||.||:   .|           |:.|:|.|:.:||||: .|.. 
  Rat   592 EL-VTNSGKFLILDRM-----LPELKK---RC-----------HKVLVFSQMTSMLDIL-MDYC- 634

  Fly  1736 RHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPM 1800
             ||.:.|:.|||||:..|:|:..:.:||:||.:.:.|::|..||||:|||.|||||..:.||||.
  Rat   635 -HLRNFTFSRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQ 698

  Fly  1801 KDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFD 1865
            .||||.||.|||||.|.|.||||:|.|::::||:..            :|....|:.:       
  Rat   699 SDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVER------------AAAKRKLEKL------- 744

  Fly  1866 LFNGGKDKGAESGSSAVQGTASGGMSMNTI-IENLPELWSEHQYEEE 1911
            :.:....||.:||.|         .|.|.: .:.|.||.....||.|
  Rat   745 IIHKNHFKGGQSGLS---------QSKNFLDAKELMELLKSRDYERE 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 187/585 (32%)
HellsNP_001099841.1 DEXHc_HELLS_SMARCA6 219..452 CDD:350767 86/250 (34%)
PLN03142 220..>797 CDD:215601 199/637 (31%)
Blue background indicates that the domain is not in the aligned region.

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