DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and hrp1

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_593660.1 Gene:hrp1 / 2542363 PomBaseID:SPAC1783.05 Length:1373 Species:Schizosaccharomyces pombe


Alignment Length:703 Identity:213/703 - (30%)
Similarity:326/703 - (46%) Gaps:158/703 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1306 DGKTE------QLKSD--------------PLQARKTRDREFLDYL------FNPKSIPNY---- 1340
            :||||      ||..|              |.:..:...||...||      :|.:  |.|    
pombe   317 EGKTEYFVKWRQLPYDNCTWEDADVIYSMAPNEVYQFLQRENSPYLPYKGVFYNTR--PPYRKLE 379

  Fly  1341 KVPVPI-SVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAG-DHMHRQTANLAN 1403
            |.|..| ..|:|.:|..||||:.:|...|.:|||.|:||||||:||:|.|:. .|..:|..    
pombe   380 KQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHG---- 440

  Fly  1404 LPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLR--------SDIGTKCNLVVA 1460
             |.|::.|.:....|   .|...:....|..:.|.|....|..:|        :....|.|:::.
pombe   441 -PFLIVVPLSTVPAW---QETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLT 501

  Fly  1461 SYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSL 1525
            :|:.:.||....:.|.:.|..:||.|.:||.::...:.:.:.:..:||:::|||:|||:.||.||
pombe   502 TYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASL 566

  Fly  1526 FDFLMPG--FLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVL 1588
            .:|||||  ::..|..|            |..::.:|::     :..|..::.||:|||:|:||.
pombe   567 VNFLMPGKFYIRDELNF------------DQPNAEQERD-----IRDLQERLQPFILRRLKKDVE 614

  Fly  1589 KDLPPKITQDLLCELSPLQLRLYEDFSNKH---LKDCLDKLGDSSSASMVTENLSAKTHIFQALR 1650
            |.||.|..:.|..|||.:|...|::...|:   |....|..|..|..::|.|             
pombe   615 KSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVE------------- 666

  Fly  1651 YLQNVCNHPKLVLRQSEEL---TKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVS 1712
             |:.|.|||.|....:|:.   .|:|.:..|...    |.:|.|:..|.:||       |.....
pombe   667 -LKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGI----IMNSGKMVLLDKLL-------QRLKHD 719

  Fly  1713 QHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSID-VLLLTTM 1776
            .||.|||.|:..||:|:.:.:   .|....|.||||::|||.|:..:::||:..|.| |.||:|.
pombe   720 GHRVLIFSQMVRMLNILGEYM---SLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTR 781

  Fly  1777 VGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1841
            .||||:||..|||||..:.||||..|||||.||||||||..|||||.::::::||.|:...:.|:
pombe   782 AGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKM 846

  Fly  1842 LTANTVVS-----------------AENASLQTMGTSQIF---------------DLFNGGKDKG 1874
            :....::|                 .|.:::...|.|.:|               |:.:..:|: 
pombe   847 ILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLENMNLDDILSHAEDR- 910

  Fly  1875 AESGSSAVQGTASGG----------------MSMNTIIENLPELWSEHQYEEE 1911
              ..|:.|.|.:.||                ::.:.||   ||...|...|||
pombe   911 --DSSNDVGGASMGGEEFLKQFEVTDYKAEDLNWDDII---PEEEMERIEEEE 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 177/525 (34%)
hrp1NP_593660.1 CD1_tandem_CHD1_yeast_like 207..266 CDD:349312
CD2_tandem 302..355 CDD:349306 8/37 (22%)
PLN03142 377..>909 CDD:215601 184/584 (32%)
Cdh1_DBD_1 1010..1090 CDD:408024
CHDCT2 1132..>1159 CDD:462358
Blue background indicates that the domain is not in the aligned region.

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