DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and Rad54l

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_033041.3 Gene:Rad54l / 19366 MGIID:894697 Length:747 Species:Mus musculus


Alignment Length:693 Identity:207/693 - (29%)
Similarity:327/693 - (47%) Gaps:135/693 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1235 LLPLLGKIEQLIERQGAIEA------IERVVSR-LQIKVVPYIVLLVVPLLG--------AMSDP 1284
            |.|....:.||:.|...:::      |..::|: .::.:..|...|....||        |:.||
Mouse    48 LSPFRKPLTQLLNRPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDP 112

  Fly  1285 DESVRLLSTHCFANLVQLMPLDGKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPI-SV 1348
            .|...|:       |.:..||... :|||.|                  .:.:|.:.|..|| |.
Mouse   113 LEEGALV-------LYEPPPLSAH-DQLKLD------------------KEKLPVHVVVDPILSK 151

  Fly  1349 ELRCYQQAGINWLW-FLNKYNL---HG-ILCDDMGLGKTLQTICILAGDHMHRQTANLANLP--- 1405
            .||.:|:.|:.:|| .:....:   || |:.|:||||||||  ||.....:.||:....  |   
Mouse   152 VLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQ--CITLMWTLLRQSPECK--PEIE 212

  Fly  1406 -SLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTKCN------------- 1456
             ::|:.|.:|..:|..||||:|  |..::||...|      ..:.:|..|..             
Mouse   213 KAVVVSPSSLVKNWYNEVEKWL--GGRIQPLAIDG------GSKDEIDRKLEGFMNQRGARVPSP 269

  Fly  1457 LVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLE 1521
            :::.||:|.|..:......:....:.||||.:||.:.::.:|:..|..:.|:::|||||||::||
Mouse   270 ILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLE 334

  Fly  1522 LWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED 1586
            .:||..|:..|.|||..:|.:.|..|||.||||.:|..:::.|...:..|...|...|:||..:.
Mouse   335 YFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDI 399

  Fly  1587 VLKDLPPKITQDLLCELSPLQLRLYEDF-----SNKHLKDCLDKLGDSSSASMVTENLSAKTHIF 1646
            :.|.||.||.|.:.|.|:|||..||:.|     ..:.|::  .|:..||.:|:.:          
Mouse   400 LSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE--GKMSVSSLSSITS---------- 452

  Fly  1647 QALRYLQNVCNHPKLVLRQ--SEELTKVTSQLALSNSSLDDIE---------HSAKL--PAL--K 1696
                 |:.:||||.|:..:  :||               |..|         :::|.  |.|  |
Mouse   453 -----LKKLCNHPALIYDKCVAEE---------------DGFEGTLGIFPPGYNSKAVEPQLSGK 497

  Fly  1697 QLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQ-DLLRRHLPSVTYLRLDGSVPASQRQDIVN 1760
            .|:||..:.| |.|.|..:.::.......||:.|: ..:||:|    |:||||::...:|..:|.
Mouse   498 MLVLDYILAV-TRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYL----YVRLDGTMSIKKRAKVVE 557

  Fly  1761 NFNSDPSID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLI 1824
            .|||..|.| |.:|::..||.||||.||:.::..:.||||..|.|||.|..|.||||:..:|||:
Mouse   558 RFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLL 622

  Fly  1825 TRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFDLF 1867
            :..::||||...|..|...::.||..|....:.....::.:||
Mouse   623 SAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELF 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 179/551 (32%)
Rad54lNP_033041.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Required for chromatin remodeling, strand pairing activities and coupling of ATPase activity. /evidence=ECO:0000250 2..9
HepA <97..647 CDD:440319 194/624 (31%)
DEXHc_RAD54A 153..395 CDD:350825 81/253 (32%)
DEGH box 296..299 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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