DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and isw-1

DIOPT Version :9

Sequence 1:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001379931.1 Gene:isw-1 / 175944 WormBaseID:WBGene00002169 Length:1009 Species:Caenorhabditis elegans


Alignment Length:664 Identity:206/664 - (31%)
Similarity:312/664 - (46%) Gaps:104/664 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1276 PLLGAMSDPDES---------VRLLS-----THCF----ANLVQLMPLD---------------- 1306
            |.:....:|:.|         .|||.     :||.    |.|....|:|                
 Worm    29 PSMEVDDEPESSDAADSFKRFERLLQKTENFSHCLSSGDAKLATGAPVDTKKRGRPSKKNGIDGD 93

  Fly  1307 ---GKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYN 1368
               .||||.:.:.:.|...:..:.:.:..:|..|.|        .|:|.||..|:|||..|....
 Worm    94 HRHRKTEQEEDEEMVADAIKSDDLVIFDKSPFYIEN--------GEMRDYQVRGLNWLASLQHNK 150

  Fly  1369 LHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLR 1433
            ::|||.|:||||||||||.::.....::..|:    |.|||.|.:...:|..|.:|:...   :.
 Worm   151 INGILADEMGLGKTLQTISMIGYMKHYKNKAS----PHLVIVPKSTLQNWANEFKKWCPS---IN 208

  Fly  1434 PLHYYGFPVGREKLRSDI--GTKCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSS 1496
            .:...|....|.::..|:  ..|.::...:|:.:.|.......:::.|.::||.|.|||.|:|.|
 Worm   209 AVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLS 273

  Fly  1497 KAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQ 1561
            :.::.|.:.:||:::|||:|||:.|||:|.:||:|....:...|...|      |.||.|...: 
 Worm   274 ETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWF------SNDAMSGNTD- 331

  Fly  1562 EAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKL 1626
                 .::.||:.:.||||||:|.||.|.|.||....:...||.:|...|    .|.|...:|.:
 Worm   332 -----LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWY----TKVLMKDIDII 387

  Fly  1627 GDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDDIEHSAK 1691
            ..:....        |..:...|.:|:...|||.| ...:|.....|:...|       :::|.|
 Worm   388 NGAGKVE--------KARLMNILMHLRKCVNHPYL-FDGAEPGPPFTTDQHL-------VDNSGK 436

  Fly  1692 LPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQ 1756
            :..|.:||:..     .|..|  |.|||.|...|||::|.....||   ..|.|||||.|...|.
 Worm   437 MVVLDKLLMKF-----KEQGS--RVLIFSQFSRMLDLLEDFCWWRH---YEYCRLDGSTPHEDRS 491

  Fly  1757 DIVNNFNS-DPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNV 1820
            :.:..:|: |....:.:|||..||||:||..||.||..:.||||..|||||||||||||||.|.|
 Worm   492 NAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRV 556

  Fly  1821 YRLITRNSLEEKIMGLQKFKILTANTVVSAENAS--LQTMGTSQIFDLFNGGKDKGAESGSSAVQ 1883
            :||||.|:::|:|:...:.|:...|.|:.....|  .:|:|...:..:..    .|||...:|..
 Worm   557 FRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGDMISMIR----HGAEQVFAAKD 617

  Fly  1884 GTASGGMSMNTIIE 1897
            .|.|.. .::||:|
 Worm   618 STISDD-DIDTILE 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874
HEAT repeat 1234..1261 CDD:293787
HEAT repeat 1269..1298 CDD:293787 8/39 (21%)
SNF2_N 1353..1662 CDD:278600 96/310 (31%)
DEXDc 1370..1514 CDD:238005 43/145 (30%)
Helicase_C 1689..1813 CDD:278689 55/124 (44%)
isw-1NP_001379931.1 PLN03142 48..1008 CDD:215601 203/645 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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