DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and CHD1

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001351042.1 Gene:CHD1 / 1105 HGNCID:1915 Length:1798 Species:Homo sapiens


Alignment Length:621 Identity:209/621 - (33%)
Similarity:310/621 - (49%) Gaps:100/621 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1311 QLKSDPL---QARKTRDREFLDYLFNPKSIPNYKVPVPISVELRCYQQAGINWL---WFLNKYNL 1369
            |.|:.|.   :..|.|.| |:.....|..|..::     .:|||.||..|:|||   |.  |.| 
Human   445 QSKTTPFKDCKVLKQRPR-FVALKKQPSYIGGHE-----GLELRDYQLNGLNWLAHSWC--KGN- 500

  Fly  1370 HGILCDDMGLGKTLQTICILAG-DHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLR 1433
            ..||.|:||||||:|||..|.. .|.|:...     |.|::.|.:....|..|::.:..|   :.
Human   501 SCILADEMGLGKTIQTISFLNYLFHEHQLYG-----PFLLVVPLSTLTSWQREIQTWASQ---MN 557

  Fly  1434 PLHYYGFPVGREKLRSDIGT-------KCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNG 1491
            .:.|.|....|..:|:...|       |.|:::.:|:.:.||..|..|:::.:..:||.|.:||.
Human   558 AVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKND 622

  Fly  1492 KTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRD-AK 1555
            .:...|.:...|:||||:::|||:||::.|||||..|:||          ::||    |..| .:
Human   623 DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP----------EKFS----SWEDFEE 673

  Fly  1556 SSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLK 1620
            ...|.:|.|   ..:||:::.||||||||:||.|.||.|:.|.|..|:|.||.:.|:....::.|
Human   674 EHGKGREYG---YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYK 735

  Fly  1621 DCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDD 1685
             .|.| |...|.|          .....:..|:..|||..|: :..:.......|.||.:.    
Human   736 -ALSK-GSKGSTS----------GFLNIMMELKKCCNHCYLI-KPPDNNEFYNKQEALQHL---- 783

  Fly  1686 IEHSAKLPALKQLLL---DCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLD 1747
            |..|.||..|.:||:   :.|          :|.|||.|:..||||:.:.|..|..|   :.|||
Human   784 IRSSGKLILLDKLLIRLRERG----------NRVLIFSQMVRMLDILAEYLKYRQFP---FQRLD 835

  Fly  1748 GSVPASQRQDIVNNFNSDPSID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHR 1811
            ||:....|:..:::||::.|.| ..||:|..||||:||..||||:..:.||||..||||..||||
Human   836 GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR 900

  Fly  1812 IGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFDLFNGGKDKGAE 1876
            |||||.||:|||:|:.|:||.|:...|.|::..:.|:       |.|.|:        ||.. ..
Human   901 IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVI-------QRMDTT--------GKTV-LH 949

  Fly  1877 SGSSAVQGTASGGMSMNTIIE-NLPELWSEHQYEEE 1911
            :||:....|......::.|:: ...||:.|.:.||:
Human   950 TGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQ 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 186/522 (36%)
CHD1NP_001351042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..252
CD1_tandem_CHD1-2_like 276..354 CDD:349313
CD2_tandem_CHD1-2_like 387..443 CDD:349308
DEAD-like_helicase_N 460..697 CDD:475120 87/270 (32%)
PLN03142 464..>1000 CDD:215601 202/601 (34%)
DEAH box 614..617 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1080..1120
CDH1_2_SANT_HL1 1124..1210 CDD:477096
DUF4208 1496..1586 CDD:464035
U2AF_lg 1640..>1734 CDD:273727
U2AF_lg 1688..>1797 CDD:273727
HisXaaSer_A3 <1719..1750 CDD:439608
Blue background indicates that the domain is not in the aligned region.

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