DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mor and SWI3C

DIOPT Version :9

Sequence 1:NP_524373.1 Gene:mor / 41942 FlyBaseID:FBgn0002783 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_173589.1 Gene:SWI3C / 838774 AraportID:AT1G21700 Length:807 Species:Arabidopsis thaliana


Alignment Length:1028 Identity:233/1028 - (22%)
Similarity:366/1028 - (35%) Gaps:376/1028 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 PAASSGGGKQKRRRSPSPASSASTSKPGKRKRSPAVVHKKSRNDDDDEDLTRDLDDPPAEPNVQE 359
            ||:....||.||::.   ...::..||.:.:.......:::.|::::|     :||......:|:
plant     2 PASEDRRGKWKRKKR---GGLSAARKPKQEEEDMEEEDEENNNNNNEE-----MDDVENADELQQ 58

  Fly   360 VHKANAALQSTASPAPG--------------------------------------------GKSR 380
                    ...|:|.||                                            |::|
plant    59 --------NGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETR 115

  Fly   381 GDNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVT- 444
            |.        |::..|::...|  ..||:||...::....::..:|:....|.....|.|..|. 
plant   116 GQ--------GSLPALENISFG--QLQALSTVPADSLDLERSDGSSSAYVISPPPIMDGEGVVKR 170

  Fly   445 --EQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYL 507
              :..|  ::|.:|.||..|::..:|::.:|:||:.|:.:.|||.||.:||.::..|..||.:.|
plant   171 FGDLVH--VLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTL 233

  Fly   508 TSTACRRNLAG-DVCAIMRVHAFLEQWGLINYQIDADVRPTPMGPPPTSHFHILSDTPSGLQSIN 571
            |.:.|:..:.| |:....||..||:.||:|||...|...|.|           |.|.....:..|
plant   234 TISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGP-----------LRDVSDVREDTN 287

  Fly   572 PQKTQQPSAAKTLLD----LDKKPLGKDGGLELGDKSGLTG--------IKTEALE---NGAAGG 621
            .: ...||||.|.:|    .||......||........|.|        |:....:   |..:..
plant   288 GE-VNVPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRP 351

  Fly   622 LSSGVSQFGLK---------------------LDQYAKKPAAMRNRTAASMAREWTDQETLLLLE 665
            |.:...|...|                     ||.....|..........   .|||||||||||
plant   352 LPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGD---NWTDQETLLLLE 413

  Fly   666 GLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLE----------------------DDGG 708
            .:|::.::|.::.:||||:::.:|||||||||:||..|:                      |..|
plant   414 AVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHKGTDSNG 478

  Fly   709 FLGPLACQ------PIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMD 767
            .|...:.|      .:||.||.||:|:.||||||.|.|||||:.|.   |..:.:.::       
plant   479 DLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAH---ESLSVLSED------- 533

  Fly   768 NHLKNVEKASAGGKFNPNFGLANSGIAGTGNDKDDEEGKEGGASASAGGSDEEMKDLSKKDDDAK 832
                                           |:...||.:|..::...|.:::            
plant   534 -------------------------------DRMKSEGMQGKEASLLDGENQQ------------ 555

  Fly   833 SKDNTKSDKTNTNTDSSSTSSSATGNTNNTDKKPKESSGSSPSGDKSAIKSDKSNKSSPTETAAA 897
                                                              .|.::|:|       
plant   556 --------------------------------------------------QDGAHKTS------- 563

  Fly   898 ASGGEVDIKTEDSSGDGETKDGTEAKEGTGTGTGPLAVPKEGTFSENNMQTAAAAALASAAVKAK 962
                              :::|.||:.       ||        .::.:..|..|.|::||.|||
plant   564 ------------------SQNGAEAQT-------PL--------PQDKVMAAFRAGLSAAATKAK 595

  Fly   963 HLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQL 1027
            ..|..|||:|:.|.|.:|..|:|::|:||:.|.|:|..:.:|.|.:|..||:...||     .::
plant   596 LFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAER-----ARM 655

  Fly  1028 KAAEFRAR----------------------QQAHHRLQQELQGQAAAGSMILPQQQQLPQ----- 1065
            .:|.|.:.                      ....|:..|:.|..|.:...|:|.....||     
plant   656 LSARFGSPGGISPQTNNLQGMSLSTGGNNINSLMHQQHQQQQASATSQPSIIPGFSNNPQVQAQM 720

  Fly  1066 ---AQQPQQQQQTLPPHPHLAQQQQLPPHPHQLPPQS-QPLAGPTAQHQPLPPHVVSSPNGAPFA 1126
               |:|.|||||      ...||||......:||..: |..||.||           |||     
plant   721 HFMARQQQQQQQ------QQQQQQQAFSFGPRLPLNAIQTNAGSTA-----------SPN----- 763

  Fly  1127 APPISLTGGLPPGAPTAIVTNPSDQTGPVAAGAAQSQAPT---PMDTTPPSSG 1176
                             ::...:....|.|||||....|:   ||..:...||
plant   764 -----------------VMFGNNQLNNPAAAGAASINQPSFSHPMVRSSTGSG 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
morNP_524373.1 SWIRM-assoc_2 6..446 CDD:293105 32/197 (16%)
RSC8 417..>742 CDD:227584 114/392 (29%)
SWIRM 453..538 CDD:282311 32/85 (38%)
SWIRM-assoc_3 738..801 CDD:293107 9/62 (15%)
SWIRM-assoc_1 962..1031 CDD:293104 24/68 (35%)
SWI3CNP_173589.1 RSC8 177..631 CDD:227584 150/611 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 65 1.000 Domainoid score I3629
eggNOG 1 0.900 - - E1_COG5259
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683891at2759
OrthoFinder 1 1.000 - - FOG0001152
OrthoInspector 1 1.000 - - otm2445
orthoMCL 1 0.900 - - OOG6_100909
Panther 1 1.100 - - LDO PTHR12802
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X781
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.820

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