DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mor and Smarcc2

DIOPT Version :9

Sequence 1:NP_524373.1 Gene:mor / 41942 FlyBaseID:FBgn0002783 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_001359324.1 Gene:Smarcc2 / 68094 MGIID:1915344 Length:1244 Species:Mus musculus


Alignment Length:1277 Identity:561/1277 - (43%)
Similarity:746/1277 - (58%) Gaps:248/1277 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKN 71
            ||||.||:.::::.:|:..|:::|.||.||.|||:  .:||.|.:||:.|::..||:.|...||:
Mouse     5 KKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYI--QAEPPTNKSLSSLVVQLLQFQEEVFGKH 67

  Fly    72 SADPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQ 136
            .::.|.|::|::||||||:||.||.|.:..::|:::|..:::||   :||:|.|.|:::.:.||:
Mouse    68 VSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDF---QNPSRMDRNVEMFMTIEK 129

  Fly   137 ALVEADLYRIPYIYIRPEIEKGFEGKLREILDNRRVEIVSDEEDATHIVYPVV-DPHPDEYARPI 200
            :||:.:....|.|::.||||....|||::|:...:..|..|:.:|:|:||||. :...:|:.||:
Mouse   130 SLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYPVPGNLEEEEWVRPV 194

  Fly   201 FKRGGHVMLHWYYFPESYDSWAVNNFDLPDHIP--------ENPESPAERWRVSASWIVDLEQYN 257
            .||...|:|||.|:|:|||:|          ||        |:..:|.:..:|.|.||:|.:.:|
Mouse   195 MKRDKQVLLHWGYYPDSYDTW----------IPASEIEASVEDAPTPEKPRKVHAKWILDTDTFN 249

  Fly   258 EWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPAA----SSGGGKQKRRRSPSPASSAST 318
            |||.||||||.:.....:.::::|...:.   ||...|.:    ..||..:||:|||||:.:...
Mouse   250 EWMNEEDYEVSDDKSPVSRRKKISAKTLT---DEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEA 311

  Fly   319 SKPGKRK--RSPAVVHKKSRNDDDDEDLTRDLDDPPAEPNVQEVHKANAALQSTASPAPGGKSRG 381
            .|...:|  .:|....|:...:::.||||:|:|:|...|||:||     .|..|.:      ::.
Mouse   312 KKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEV-----TLPKTVN------TKK 365

  Fly   382 DNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGENSQ-TGKTSDNSNTQEFSSSAKE-DM-EDNV 443
            |::..|:|||||||||::             |.|:.: |||..|.::|.......|. |: ||||
Mouse   366 DSESAPVKGGTMTDLDEQ-------------DDESMETTGKDEDENSTGNKGEQTKNPDLHEDNV 417

  Fly   444 TEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLT 508
            ||||||||:|||:|||||||:|.||:||:|||||.||||||||||:||||||||||||||.||||
Mouse   418 TEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT 482

  Fly   509 STACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADVRPTPMGPPPTSHFHILSDTPSGLQSINPQ 573
            |||||||||||||||||||||||||||||||:||:.||||||||||||||:|:||||||..:.| 
Mouse   483 STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQP- 546

  Fly   574 KTQQPSAAKTLLDLDKKPLGKDGGLELGDKSGLTGIKTEALENGAAGG---LSSGVSQ------- 628
                           |.|.|:.  ::...|:|..|.:.:.|....|.|   |.|..||       
Mouse   547 ---------------KPPQGRQ--VDADTKAGRKGKELDDLVPETAKGKPELQSSASQQMLNFPE 594

  Fly   629 -----------FGLKLDQYAKKPAAMRNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVG 682
                       |||:.|.|.||....:::.|||..||||:||||||||.|||:|||||||.||||
Mouse   595 KGKEKPADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVG 659

  Fly   683 SRTQDECILHFLRLPIEDPYLEDDGGFLGPLACQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAA 747
            |||||||||||||||||||||||....|||||.||||||:||||:||||||||||||||||:|||
Mouse   660 SRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAA 724

  Fly   748 KAAMEEFAAIKDEVPATIMDNHLKNVEKAS-AGGKFNPNFGLANSGIAGTGND------------ 799
            |:|:|||:.:|:|||..:::.|::.||:|: ..||.:|.|||.:||||||.:|            
Mouse   725 KSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDEPERIEESGTEE 789

  Fly   800 -----------KDDEEGKEGGASASAGGSDEEMKDLSKKDDDAKSKDNTKSDKTNTNTDSSSTSS 853
                       |:.:|.:|||.:... .:.||:.::.|||::                       
Mouse   790 ARPEGQAADEKKEPKEPREGGGAVEE-EAKEEISEVPKKDEE----------------------- 830

  Fly   854 SATGNTNNTDKKPKESSGS---SPSGDKSAIKSDKSNKSSPTETAAAASGGEVDIKTEDSSGDGE 915
              .|...:::|:.::|.|.   .|..||           .|||       |:.::..|.:..:||
Mouse   831 --KGKEGDSEKESEKSDGDPIVDPEKDK-----------EPTE-------GQEEVLKEVAEPEGE 875

  Fly   916 TKDGTEAKEGTGTGTGPLAVPKEGTFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLV 980
            .|...|...|                 |.|:.||||||||:||||||||||:|||||||||||||
Mouse   876 RKTKVERDIG-----------------EGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLV 923

  Fly   981 ETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQE 1045
            ||||||||||||||||||..|:||||.||||||||:.:||.||:||||.||.|||||...::.| 
Mouse   924 ETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQ- 987

  Fly  1046 LQGQAAAGSMILPQQQQLPQAQQPQQQQQTLPPHPHLAQQQQLPPHPHQLPPQSQPLAGPTAQHQ 1110
                                                  ||||.||   .|||.|||:. ||....
Mouse   988 --------------------------------------QQQQQPP---TLPPGSQPIP-PTGAAG 1010

  Fly  1111 PLPPHVVSSPNGAPFAAPPISLTGGLPPGAPTAIVTNPSDQTG----------PVAAGAAQSQAP 1165
            |...|.::.|..|..:|||.|   |.|||:     ..||:|.|          |..|||.|..|.
Mouse  1011 PPTVHGLAVPPAAVASAPPGS---GAPPGS-----LGPSEQIGQAGTTAGPQQPQQAGAPQPGAV 1067

  Fly  1166 TPMDTTPPSSGPVSDANAPPGSAMPPGGIPPANTAPIAGVAP 1207
            .|....|...||....|.|...:|.||.:|.:....:||.||
Mouse  1068 PPGVPPPGPHGPSPFPNQPTPPSMMPGAVPGSGHPGVAGNAP 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
morNP_524373.1 SWIRM-assoc_2 6..446 CDD:293105 162/456 (36%)
RSC8 417..>742 CDD:227584 222/348 (64%)
SWIRM 453..538 CDD:282311 76/84 (90%)
SWIRM-assoc_3 738..801 CDD:293107 35/86 (41%)
SWIRM-assoc_1 962..1031 CDD:293104 57/68 (84%)
Smarcc2NP_001359324.1 SWIRM-assoc_2 7..420 CDD:374579 160/454 (35%)
RSC8 379..>739 CDD:227584 240/390 (62%)
SWIRM-assoc_3 715..779 CDD:374581 35/63 (56%)
PTZ00121 <721..>957 CDD:173412 117/296 (40%)
SWIRM-assoc_1 <911..977 CDD:374578 54/65 (83%)
PHA03247 <994..1233 CDD:223021 45/128 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 298 1.000 Domainoid score I1451
eggNOG 1 0.900 - - E1_COG5259
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2312
Inparanoid 1 1.050 963 1.000 Inparanoid score I325
Isobase 1 0.950 - 0 Normalized mean entropy S2053
OMA 1 1.010 - - QHG55866
OrthoDB 1 1.010 - - D289848at33208
OrthoFinder 1 1.000 - - FOG0001152
OrthoInspector 1 1.000 - - otm44138
orthoMCL 1 0.900 - - OOG6_100909
Panther 1 1.100 - - O PTHR12802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3405
SonicParanoid 1 1.000 - - X781
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.820

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