DRSC/TRiP Functional Genomics Resources

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Protein Alignment mor and Mysm1

DIOPT Version :10

Sequence 1:NP_524373.1 Gene:mor / 41942 FlyBaseID:FBgn0002783 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_001415855.1 Gene:Mysm1 / 298247 RGDID:1311787 Length:811 Species:Rattus norvegicus


Alignment Length:385 Identity:93/385 - (24%)
Similarity:153/385 - (39%) Gaps:107/385 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 SPAERWRVSASWIVDLEQYNEWMAEEDYEVDEQG---------------KKKTHKQ-----RMSI 282
            |||:....|..|.:           |:.::.|||               |.:|..|     |...
  Rat   107 SPAKPSSYSVKWTI-----------EEKKLFEQGLAKFGRRWTKIAALVKSRTVLQVKSYARQYF 160

  Fly   283 DDIMSFGDEKKKPAASSGGGKQKRRRSPSP----ASSASTSKPGKRKRSPAVVHKKSRNDDDDED 343
            .:.:.:|.||:.|...|....|.:.:....    ||..:.:          .|..:..:||:|.|
  Rat   161 RNKVKWGAEKETPTLKSNSDLQVKNKDERTKVWVASDPNLN----------AVKIEKLSDDEDVD 215

  Fly   344 LTRDLDDPPAEPNVQ-------------EVHKAN-AALQSTASPAPGGKSRGDNDMMPIKGGTMT 394
            :|.:||:..::.:.:             :::|.| ..|....|.|   ||..:| :..:|     
  Rat   216 ITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQEGSLA---KSAEEN-LQNVK----- 271

  Fly   395 DLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSN-------------TQEFSSS-------AKEDM 439
              ..|....|:::.||..:.:|: .||.|...|             |:|...|       .::|.
  Rat   272 --QSEAEACSSSEIMSWAEKQNN-NGKNSVELNEKYSKLVEEYTMLTEETKHSPSPEPCEGQKDP 333

  Fly   440 EDN--------VTEQTH---HIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRN 493
            ..|        |.|:.|   .:..|......|.|.|...||:|:||||..: ::||||.|:..||
  Rat   334 RGNELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQAIPEFFEGR-QTKTPERYLKIRN 397

  Fly   494 FMIDTYRLNPTEYLTSTACRRNL--AGDVCAIMRVHAFLEQWGLINYQIDADV--RPTPM 549
            :::|.:.:...:||..|:.|..|  .|||..|.|:|.:||..|.||:..:..:  ||.|:
  Rat   398 YILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAIYNRPQPV 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
morNP_524373.1 SWIRM-assoc_2 6..446 CDD:465143 53/273 (19%)
RSC8 417..>742 CDD:227584 50/168 (30%)
SWIRM-assoc_3 738..803 CDD:465145
DUF4670 <863..1049 CDD:464815
SWIRM-assoc_1 962..1031 CDD:465142
PHA03247 <1100..1209 CDD:223021
Mysm1NP_001415855.1 None
Blue background indicates that the domain is not in the aligned region.

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