DRSC/TRiP Functional Genomics Resources

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Protein Alignment mor and swsn-1

DIOPT Version :9

Sequence 1:NP_524373.1 Gene:mor / 41942 FlyBaseID:FBgn0002783 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_001256907.1 Gene:swsn-1 / 180324 WormBaseID:WBGene00004203 Length:792 Species:Caenorhabditis elegans


Alignment Length:915 Identity:375/915 - (40%)
Similarity:464/915 - (50%) Gaps:255/915 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 KSRNDDDDEDLTRDLDDPPAEPNVQEVHKANAALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDD 398
            |.|.||||.|::...||..:        ::.||::   ...|.||.: |.:....||..:||||:
 Worm     7 KRRRDDDDGDVSMTGDDDDS--------RSGAAVK---VEVPKGKEK-DAEFSAPKGQKLTDLDE 59

  Fly   399 EMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNS 463
            |              |..|          |:|    |.:..|.||.||||:|:||||:.|||||:
 Worm    60 E--------------GVQS----------TKE----APQLAEGNVIEQTHYIVVPSYAGWFDYNA 96

  Fly   464 IHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHA 528
            ||.|||||||||||.|||||||::|:||||||:|||||||.||:::||||||||||||:|:|:|:
 Worm    97 IHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHS 161

  Fly   529 FLEQWGLINYQIDADVRPTPMGPPPTSHFHILSDTPSGLQSINPQKTQQPSAAKTLLDLDKKPLG 593
            |||||||:|||:|:|.||.|:.|||||||.:|:|||:|:|.:||.                   |
 Worm   162 FLEQWGLLNYQVDSDARPAPVAPPPTSHFMVLADTPTGIQPMNPP-------------------G 207

  Fly   594 KDGGLELGDKSGLTG------IKTEALENGAAGGLSSGVSQFGLKLDQYAKKPAAMRNRTAASMA 652
            |       :.:|.:|      ||||.          ..:|..|||:|||.|:..|||.: .|...
 Worm   208 K-------ESAGASGEPPKEEIKTEI----------ESISTPGLKIDQYQKQAIAMRTK-GAPPG 254

  Fly   653 REWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDD----------G 707
            |:||:|||.||||.|||.||||||||:|||:|||.||:|.||:|||:||||.::          |
 Worm   255 RDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPG 319

  Fly   708 G----FLGPLACQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDN 768
            |    .|||||.||:|||:||||:|||||||||||||:|||||.|||||||..:|:|:|..:.:.
 Worm   320 GAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIPPLVAEA 384

  Fly   769 HLKNV-EKASAGGKFNPNFGLANSGIAGTGNDKDDEEGKEGGASASAGGSDEEMKDLSKKDDDAK 832
            |.||| ..|...|:.:...||..||:      |..||        :||.|||:|           
 Worm   385 HEKNVAAMAEKTGQVDGAVGLTKSGL------KPAEE--------AAGDSDEKM----------- 424

  Fly   833 SKDNTKSDKTNTNTDSSSTSSSATGNTNNTDKKPKESSGSSPSGDKSAIKSDKSNKSSPTETAAA 897
                    .||||.|..||                                              
 Worm   425 --------DTNTNDDVPST---------------------------------------------- 435

  Fly   898 ASGGEVDIKTEDSSGDGETKDGTEAKEGTGTGTGPLAVPKEGTFSENNMQTAAAAALASAAVKAK 962
                                  ||||.....|                :|.|||:.||:||||||
 Worm   436 ----------------------TEAKSAIDKG----------------VQAAAASCLAAAAVKAK 462

  Fly   963 HLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQL 1027
            |||.:|||:||||||.||||||||||:|||||:|||..|::|||.|||||.|||.|||.||::||
 Worm   463 HLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQL 527

  Fly  1028 KAAEFRARQQAHHRLQQELQGQAAAGSMILPQQQQLPQAQQPQQQQQTLPPHPHLAQQQQLPPHP 1092
            |..|.||:.:||.|:..  .|...||   ||...::....||..|.|.......:.::.......
 Worm   528 KYLENRAKHEAHSRMTS--SGALPAG---LPPGFEVTGPPQPTPQVQISAQEAAIPEKMDTSEAA 587

  Fly  1093 HQLPPQSQPLA--GPTAQHQPLPPHVVSSPNGAPFAAPPISLTG-GLPPGAPTAIVTNPSDQTGP 1154
            ....|.|.|.|  .|..|..|.|.....:|.     |||.:..| |.|.|.|......|..|...
 Worm   588 TAARPPSTPQAPQAPPVQAAPAPVQAPQAPQ-----APPQAYQGYGGPGGPPQQAYRYPPQQGQQ 647

  Fly  1155 VA------------AGAAQSQA----------PTPMDTTPPSSGPVSDANAPPGSAM-PPGGIPP 1196
            .:            |..|||||          |.|    ||..........|||... ||||.||
 Worm   648 YSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPP----PPQGQQYYGGPPPPGQPYGPPGGYPP 708

  Fly  1197 ANTAP 1201
            ....|
 Worm   709 QQQRP 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
morNP_524373.1 SWIRM-assoc_2 6..446 CDD:293105 30/111 (27%)
RSC8 417..>742 CDD:227584 190/344 (55%)
SWIRM 453..538 CDD:282311 66/84 (79%)
SWIRM-assoc_3 738..801 CDD:293107 28/63 (44%)
SWIRM-assoc_1 962..1031 CDD:293104 51/68 (75%)
swsn-1NP_001256907.1 RSC8 33..509 CDD:227584 294/661 (44%)
SWIRM-assoc_3 354..415 CDD:374581 29/66 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159799
Domainoid 1 1.000 161 1.000 Domainoid score I2451
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 462 1.000 Inparanoid score I866
Isobase 1 0.950 - 0 Normalized mean entropy S2053
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289848at33208
OrthoFinder 1 1.000 - - FOG0001152
OrthoInspector 1 1.000 - - oto19572
orthoMCL 1 0.900 - - OOG6_100909
Panther 1 1.100 - - LDO PTHR12802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3405
SonicParanoid 1 1.000 - - X781
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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