DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5516 and CG15784

DIOPT Version :10

Sequence 1:NP_650515.1 Gene:CG5516 / 41940 FlyBaseID:FBgn0038389 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_572223.1 Gene:CG15784 / 31461 FlyBaseID:FBgn0029766 Length:554 Species:Drosophila melanogaster


Alignment Length:128 Identity:33/128 - (25%)
Similarity:62/128 - (48%) Gaps:24/128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHRSSRTKQLSKRMSQKEADAP 71
            |.:|:.:.:|..:||           .:.:......|:::.: ...:.|||:..|:.::|:....
  Fly    56 ALKKVTKVQRMLEQA-----------MILLAEEEARCRQQEQ-EQGTKRTKKQLKKKAKKDKKKA 108

  Fly    72 KNQVEEHSEVASSEGKKVRRKRKTSKSSSSSSSSSDSSDSSSESGSSSESDSSSSSSDSDDEE 134
            |...::.:            |::..:.:::....|::|.|||.|.|||.|.||||||.|:|||
  Fly   109 KKLAKQQA------------KKQAEEQTAAGEEPSNTSSSSSSSSSSSSSSSSSSSSSSEDEE 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5516NP_650515.1 zf-CCHC_3 27..59 CDD:404753 4/31 (13%)
CG15784NP_572223.1 None

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