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Protein Alignment blp and Pam16
DIOPT Version :9
Sequence 1: | NP_001287349.1 |
Gene: | blp / 41937 |
FlyBaseID: | FBgn0038387 |
Length: | 141 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038942745.1 |
Gene: | Pam16 / 679907 |
RGDID: | 1598163 |
Length: | 244 |
Species: | Rattus norvegicus |
Alignment Length: | 136 |
Identity: | 72/136 - (52%) |
Similarity: | 94/136 - (69%) |
Gaps: | 17/136 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 AKYIAQIIVLGAQAVGRAFTKALRQEIAASQEAARRAGGGKQGDKSAESNLRTGMTLEEAKQILN 66
|||:|||||:|.|.|||||.:|||||.||||.|| ...|:.|.:||.::..:|::|:||:||||
Rat 121 AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAA--DARGRAGHQSAAASNLSGLSLQEAQQILN 183
Fly 67 ID--DPKNVDAITKNYEHLFQVNERSKGGSFYIQSKVFRAKERLDHEIKAHEQPRSSNTEAAQDT 129
|. .|:.|. |||||||:||::|.|||||:||||.|||||||.|::.. ||:.
Rat 184 ISKLSPEEVQ---KNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQ----------AQED 235
Fly 130 AEESQS 135
.|:.|:
Rat 236 REKGQT 241
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
blp | NP_001287349.1 |
DnaJ |
1..117 |
CDD:295354 |
68/116 (59%) |
Pam16 | XP_038942745.1 |
Pam16 |
121..244 |
CDD:252088 |
72/136 (53%) |
Information from Original Tools:
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