DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbxl7 and RAD7

DIOPT Version :10

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_012586.1 Gene:RAD7 / 853512 SGDID:S000003813 Length:565 Species:Saccharomyces cerevisiae


Alignment Length:415 Identity:96/415 - (23%)
Similarity:163/415 - (39%) Gaps:127/415 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 WNRKGPFRCGPLFDRLPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRPILWKVISLRGEHLNG 453
            |.::.......:|::|.|     :...:.:..|.|:|                |.:| :...|| 
Yeast   183 WQKEADESSKLVFNKLRD-----VLGGVSTANLNNLA----------------KALS-KNRALN- 224

  Fly   454 DKTLKMIFRQLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCPELTHLQLQTCVDITNQAL 518
            |.||::..:           .:::|:..:|..:||..|.:.|....|.||.|.||.|..:.:::|
Yeast   225 DHTLQLFLK-----------TDLKRLTFSDCSKISFDGYKTLAIFSPHLTELSLQMCGQLNHESL 278

  Fly   519 VEALTKCSNLQHLDVTG------------------------------------------C----- 536
            :....|..||:.|::.|                                          |     
Yeast   279 LYIAEKLPNLKSLNLDGPFLINEDTWEKFFVIMKGRLEEFHISNTHRFTDKSLSNLLINCGSTLV 343

  Fly   537 ----SQVSSISPNPHMEPPRRLLLQYL--DLTDCMAI------DDMGLKIVVKNCPQ----LVYL 585
                |::.|||       ...||.|||  |....:.|      :|:..:|::....|    |..|
Yeast   344 SLGLSRLDSIS-------NYALLPQYLVNDEFHSLCIEYPFNEEDVNDEIIINLLGQIGRTLRKL 401

  Fly   586 YLRRCIQVTDA----GL-KFVPSFCVSLKELSVSDCLNITDFGL-YELAKLGAALRYL---SVAK 641
            .|..||.:||:    || .|:|..| .|:.||:.:...||...| |..:|:  .|..|   |..:
Yeast   402 VLNGCIDLTDSMIINGLTAFIPEKC-PLEVLSLEESDQITTDSLSYFFSKV--ELNNLIECSFRR 463

  Fly   642 CERVSDAGLKVI----ARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIG--KCDVSDAG 700
            |.::.|..:..:    ||.  .||.||....:.::.::...||  ||.|..||:|  :| |.|:.
Yeast   464 CLQLGDMAIIELLLNGARD--SLRSLNLNSLKELTKEAFVALA--CPNLTYLDLGFVRC-VDDSV 523

  Fly   701 LRALAESCPNLKKLSLRSCDMITDR 725
            ::.|.|..|||..:.:...:::|::
Yeast   524 IQMLGEQNPNLTVIDVFGDNLVTEK 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 leucine-rich repeat 502..521 CDD:275381 7/18 (39%)
leucine-rich repeat 528..555 CDD:275381 8/77 (10%)
leucine-rich repeat 556..581 CDD:275381 7/32 (22%)
AMN1 577..746 CDD:187754 49/168 (29%)
leucine-rich repeat 582..607 CDD:275381 12/29 (41%)
leucine-rich repeat 608..633 CDD:275381 8/25 (32%)
leucine-rich repeat 634..659 CDD:275381 7/31 (23%)
leucine-rich repeat 660..685 CDD:275381 7/24 (29%)
leucine-rich repeat 686..710 CDD:275381 9/25 (36%)
leucine-rich repeat 711..735 CDD:275381 2/15 (13%)
leucine-rich repeat 737..761 CDD:275381
dermokine <279..>394 CDD:455732 1/4 (25%)
F-box_SF 401..444 CDD:459239 7/42 (17%)
leucine-rich repeat 441..460 CDD:275381 7/18 (39%)
leucine-rich repeat 476..501 CDD:275381 6/24 (25%)
LRR <483..>640 CDD:443914 56/228 (25%)
RAD7NP_012586.1 AMN1 228..440 CDD:187754 50/230 (22%)
leucine-rich repeat 236..261 CDD:275381 6/24 (25%)
leucine-rich repeat 262..287 CDD:275381 8/24 (33%)
leucine-rich repeat 288..340 CDD:275381 4/51 (8%)
leucine-rich repeat 342..365 CDD:275381 9/29 (31%)
leucine-rich repeat 368..397 CDD:275381 4/28 (14%)
leucine-rich repeat 398..426 CDD:275381 11/27 (41%)
leucine-rich repeat 428..455 CDD:275381 9/28 (32%)
leucine-rich repeat 456..475 CDD:275381 4/18 (22%)
leucine-rich repeat 484..507 CDD:275381 7/24 (29%)
leucine-rich repeat 508..533 CDD:275381 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.