DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and AT5G21900

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_680178.1 Gene:AT5G21900 / 832250 AraportID:AT5G21900 Length:544 Species:Arabidopsis thaliana


Alignment Length:311 Identity:81/311 - (26%)
Similarity:130/311 - (41%) Gaps:54/311 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 LQLLTRRCPELTHLQLQTCVDITNQALVEALTKCSNLQ----HLDVTGCS-------QVSSISPN 545
            ::||....|  :.:..:.||.:....||:....|..:.    .||:.|.|       |....:||
plant   190 MELLIEDSP--SEICAKNCVQLVEDDLVKIFCDCDRVSLKVLILDLCGRSMTDYTINQFFKRAPN 252

  Fly   546 PHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLVYLYLRRCIQVTDAGLKFV-PSFCVSLK 609
            ....      |..|.|.....:.|..|.::.|:.|.|.|:.|..|..:|...|:.: ..|..:|:
plant   253 GFPS------LTTLSLQGAFCLTDNALLLISKSSPLLQYINLTECSLLTYRALRILADKFGSTLR 311

  Fly   610 ELSVSDCLNIT-----DFGLYELAKLGAALRYLSVAKCERVSDAGLKVIARRCYKLRY-----LN 664
            .||:..|..|.     ...||:..|    |.|||||....|:|.    :.|..:..|.     |:
plant   312 GLSIGGCQGIKKHKGFSSSLYKFEK----LNYLSVAGLVSVNDG----VVRSFFMFRSSILTDLS 368

  Fly   665 ARGCEAVSDDSITVLARSCPRLRALDIGKCD-VSDAGLRALAESCPNLKKLSLRSCDMITDRGVQ 728
            ...|..|:|:.:..:.|.|.:|.||||...| ::|..|..:.|.|..||.|.|.| :..:|   :
plant   369 LANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTS-NRFSD---E 429

  Fly   729 CIAYYCR----GLQQL---NIQDCPVSIEGYRAVKKYCKRCIIEHTNPGFC 772
            |||.:..    .|::|   .::|  |..|...::.|.||  :::..:..:|
plant   430 CIAAFLEVSGGSLRELCLNKVRD--VGPETAFSLAKVCK--MLQFLDLSWC 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689
leucine-rich repeat 441..460 CDD:275381
AMN1 <451..595 CDD:187754 26/113 (23%)
leucine-rich repeat 476..501 CDD:275381 2/8 (25%)
leucine-rich repeat 502..521 CDD:275381 4/18 (22%)
leucine-rich repeat 528..555 CDD:275381 7/37 (19%)
leucine-rich repeat 556..581 CDD:275381 6/24 (25%)
AMN1 577..746 CDD:187754 55/187 (29%)
leucine-rich repeat 582..607 CDD:275381 7/25 (28%)
leucine-rich repeat 608..633 CDD:275381 8/29 (28%)
leucine-rich repeat 634..659 CDD:275381 9/24 (38%)
leucine-rich repeat 660..685 CDD:275381 7/29 (24%)
leucine-rich repeat 686..710 CDD:275381 10/24 (42%)
leucine-rich repeat 711..735 CDD:275381 9/23 (39%)
leucine-rich repeat 737..761 CDD:275381 7/26 (27%)
AT5G21900NP_680178.1 AMN1 221..405 CDD:187754 53/197 (27%)
leucine-rich repeat 228..244 CDD:275381 4/15 (27%)
leucine-rich repeat 257..282 CDD:275381 6/24 (25%)
leucine-rich repeat 283..309 CDD:275381 7/25 (28%)
leucine-rich repeat 310..354 CDD:275381 16/51 (31%)
AMN1 <357..507 CDD:187754 35/128 (27%)
leucine-rich repeat 364..389 CDD:275381 6/24 (25%)
leucine-rich repeat 390..415 CDD:275381 10/24 (42%)
leucine-rich repeat 416..441 CDD:275381 9/28 (32%)
leucine-rich repeat 442..467 CDD:275381 8/28 (29%)
leucine-rich repeat 468..493 CDD:275381 1/9 (11%)
leucine-rich repeat 494..516 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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