DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbxl7 and AT2G06040

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_178661.2 Gene:AT2G06040 / 815159 AraportID:AT2G06040 Length:762 Species:Arabidopsis thaliana


Alignment Length:314 Identity:77/314 - (24%)
Similarity:130/314 - (41%) Gaps:48/314 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 PEVERV----MLADGCRISDKGLQLLTRRCPELTHLQLQTCVDITNQALVEALTKC--SNLQHLD 532
            |:..||    :|.|..|:....|.||.:..|  |.:.:..|..:|.:...|....|  |||..|.
plant   396 PDTLRVKLCQLLCDSRRMDLHFLDLLVQGSP--TEICVPDCSWLTEEEFTECFKNCDTSNLMVLQ 458

  Fly   533 VTGCSQVS-------SISPNPHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLVYLYLRRC 590
            :..|.:..       :::.:|.:.|    :|..|.::....:.|:||:.:|.:.|.:..:.|.:|
plant   459 LDQCGRCMPDYILPFTLARSPKVLP----MLSTLSISGACRLSDVGLRQLVSSAPAITSINLNQC 519

  Fly   591 IQVTDAGLKFVPSFCVS-LKELSVSDCLNITDFGLYELAKLGAALRYLSVAKCERVSDAGLK-VI 653
            ..:|.:.:..:.....| |:||.:::|.||....:....|....|..||:|....|....|| .:
plant   520 SLLTSSSIDMLSDSLGSVLRELYINECQNIDMKHILAALKKFEKLEVLSLADLPSVKGRFLKEFV 584

  Fly   654 ARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGK-CDVSDAGLRALAESCP-------- 709
            ..|...|:.|.......:||.||.|::.:||.|..||:.. |.::|:.|..||..|.        
plant   585 TARGQTLKQLILTNSRKLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKLIFC 649

  Fly   710 ------------------NLKKLSLRSCDMITDRGVQCIAYYCRGLQQLNIQDC 745
                              :||:|||.:...:.......:|.:...||.|:|..|
plant   650 RNPFSDEAVAAFVETAGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWC 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689
leucine-rich repeat 441..460 CDD:275381
AMN1 <451..595 CDD:187754 31/133 (23%)
leucine-rich repeat 476..501 CDD:275381 8/28 (29%)
leucine-rich repeat 502..521 CDD:275381 3/18 (17%)
leucine-rich repeat 528..555 CDD:275381 5/33 (15%)
leucine-rich repeat 556..581 CDD:275381 6/24 (25%)
AMN1 577..746 CDD:187754 49/198 (25%)
leucine-rich repeat 582..607 CDD:275381 3/24 (13%)
leucine-rich repeat 608..633 CDD:275381 7/24 (29%)
leucine-rich repeat 634..659 CDD:275381 8/25 (32%)
leucine-rich repeat 660..685 CDD:275381 8/24 (33%)
leucine-rich repeat 686..710 CDD:275381 9/50 (18%)
leucine-rich repeat 711..735 CDD:275381 6/23 (26%)
leucine-rich repeat 737..761 CDD:275381 5/9 (56%)
AT2G06040NP_178661.2 leucine-rich repeat 427..453 CDD:275381 5/25 (20%)
AMN1 446..632 CDD:187754 48/189 (25%)
leucine-rich repeat 454..484 CDD:275381 5/33 (15%)
leucine-rich repeat 485..510 CDD:275381 6/24 (25%)
leucine-rich repeat 511..527 CDD:275381 3/15 (20%)
leucine-rich repeat 538..563 CDD:275381 7/24 (29%)
leucine-rich repeat 564..590 CDD:275381 8/25 (32%)
leucine-rich repeat 591..616 CDD:275381 8/24 (33%)
leucine-rich repeat 617..642 CDD:275381 9/24 (38%)
leucine-rich repeat 643..668 CDD:275381 0/24 (0%)
leucine-rich repeat 669..694 CDD:275381 6/24 (25%)
leucine-rich repeat 695..720 CDD:275381 5/9 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.