DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and Ppa

DIOPT Version :10

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster


Alignment Length:661 Identity:149/661 - (22%)
Similarity:239/661 - (36%) Gaps:193/661 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 NNAGGGGAGSGSGGAGGRRRAQGGRCSVPTVLSSNGSGGNGA-QYLLDKKMESLYLGNALRTLPL 243
            ||......||||.||     |..|..::      .|:|..|| .:.:|:..:...|....||   
  Fly    19 NNLNSHCGGSGSNGA-----ATSGGAAI------GGAGAGGAPSWAMDELYQQTELPGLTRT--- 69

  Fly   244 GAEASQFQNERYYLEDYSSGSGNERLPERLHHPRTSSPSETSGSDRYLLN----------RSSNS 298
            ||..:.....|:             .|..|||.......:|.....||.:          .::::
  Fly    70 GATTTHHHLLRF-------------TPYALHHRPPHHQLQTLPPALYLQHAAAAAAAAAAAAAHA 121

  Fly   299 NHLHSKGQSLSDGLCNLGRFSPSLDQGYATLVSPSPTGHHSSGGAGNVTNSTTASGAGIMASSTP 363
            .|.|.                                 ||..                       
  Fly   122 QHHHH---------------------------------HHHH----------------------- 130

  Fly   364 TTTPRRGASSNGLGGGAASAIGPPPWNRKGPFRCGPLFDRLPDEAVVRIFSWLDSCELCNVARVC 428
              .|.|.||..          .|||..       |.....|..|.:.:||..|...:|...|:||
  Fly   131 --LPHRPASPE----------SPPPVE-------GTHISNLFPELLEQIFEHLPVRDLGRAAQVC 176

  Fly   429 RRFEHLAWRPILWK----------------------------VISLRGE--------------HL 451
            ..:...|:...:||                            ::|||..              :|
  Fly   177 TAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVKRGIKKVQILSLRRSLKDLVLGVPALTSLNL 241

  Fly   452 NG-----DKTLKMIFRQLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCPELTHLQLQTCV 511
            :|     |..|        |.:.:...|.::.:.|:...:|:|..|..:.:....|..|:|..|.
  Fly   242 SGCFNVADMNL--------GHAFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCC 298

  Fly   512 DITNQALVEALTKCSNLQHLDVTGCSQVSSISPNPHMEPPRR------LLLQYLDLTDCMAIDDM 570
            :|||..|:........|:||::..|..:|..... |:....|      |.|:||.|.||..:.|.
  Fly   299 NITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIG-HLAGFSRETAEGNLQLEYLGLQDCQRLSDE 362

  Fly   571 GLKIVVKNCPQLVYLYLRRCIQVTDAGLKFVPSFCVSLKELSVSDCLNITDFGLYELAKLGAALR 635
            .|..:.:....|..:.|..|:.|||:|||.:... ..|::|::..|.||:|.|:..|.:.|:.:.
  Fly   363 ALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARM-PKLEQLNLRSCDNISDIGMAYLTEGGSGIN 426

  Fly   636 YLSVAKCERVSDAGLKVIARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGKCD-VSDA 699
            .|.|:.|:::||..|..||:..|:||.|:...|: ::|..:..:|::...|..|:||:|. ::|.
  Fly   427 SLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQ-ITDHGMLKIAKALHELENLNIGQCSRITDK 490

  Fly   700 GLRALAESCPNLKKLSLRSCDMITDRGVQCIAYYCRGLQQLN-----IQDCPVSIEGYRAVKKYC 759
            ||:.|||...|||.:.|..|..::.:|:..|....: ||:||     :: |         |...|
  Fly   491 GLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPK-LQKLNLGLWLVRXC---------VHHDC 545

  Fly   760 KRCIIEHTNPG 770
            ..|..:....|
  Fly   546 NACAAKEAARG 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 leucine-rich repeat 502..521 CDD:275381 8/18 (44%)
leucine-rich repeat 528..555 CDD:275381 7/32 (22%)
leucine-rich repeat 556..581 CDD:275381 8/24 (33%)
AMN1 577..746 CDD:187754 55/174 (32%)
leucine-rich repeat 582..607 CDD:275381 9/24 (38%)
leucine-rich repeat 608..633 CDD:275381 9/24 (38%)
leucine-rich repeat 634..659 CDD:275381 8/24 (33%)
leucine-rich repeat 660..685 CDD:275381 6/24 (25%)
leucine-rich repeat 686..710 CDD:275381 11/24 (46%)
leucine-rich repeat 711..735 CDD:275381 6/23 (26%)
leucine-rich repeat 737..761 CDD:275381 7/28 (25%)
dermokine <279..>394 CDD:455732 14/124 (11%)
F-box_SF 401..444 CDD:459239 12/70 (17%)
leucine-rich repeat 441..460 CDD:275381 9/65 (14%)
leucine-rich repeat 476..501 CDD:275381 4/24 (17%)
LRR <483..>640 CDD:443914 46/162 (28%)
PpaNP_001261138.1 F-box_FBXL14 150..190 CDD:438897 10/39 (26%)
AMN1 <226..>334 CDD:187754 23/116 (20%)
leucine-rich repeat 236..256 CDD:275381 5/27 (19%)
leucine-rich repeat 263..288 CDD:275381 4/24 (17%)
leucine-rich repeat 289..314 CDD:275381 8/24 (33%)
leucine-rich repeat 315..347 CDD:275381 7/32 (22%)
AMN1 347..524 CDD:187754 59/178 (33%)
leucine-rich repeat 348..373 CDD:275381 8/24 (33%)
leucine-rich repeat 374..398 CDD:275381 9/24 (38%)
leucine-rich repeat 399..424 CDD:275381 9/24 (38%)
leucine-rich repeat 425..450 CDD:275381 8/24 (33%)
leucine-rich repeat 451..475 CDD:275381 6/24 (25%)
leucine-rich repeat 476..501 CDD:275381 11/24 (46%)

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