DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbxl7 and Fbxl7

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001102015.1 Gene:Fbxl7 / 361907 RGDID:1305813 Length:491 Species:Rattus norvegicus


Alignment Length:521 Identity:217/521 - (41%)
Similarity:319/521 - (61%) Gaps:72/521 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 SETSGSDRYLLNRSSNSNHLHSKGQSLSDGLCNLGRFSPSLDQGYATLVSPSP------------ 334
            ||..||.....:.||:::|..:|.|.      |:.. |...|....||.:|||            
  Rat    11 SEGKGSSSVSSDVSSSTDHTPTKAQK------NVAT-SEDSDLSMRTLSTPSPALICPPALPGFQ 68

  Fly   335 TGHHSSGGAGNVTNSTTASGAGIMASSTPTT-----------TPRRGASSNGLGGGAASAIGPPP 388
            .|..||..:.::|..|.|     |..|.|.|           .|::..:|               
  Rat    69 NGRGSSTSSSSITGETVA-----MVHSPPPTRLTHPLIRLASRPQKEQAS--------------- 113

  Fly   389 WNRKGPFRCGPLFDRLPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRPILWKVISLRGEHLNG 453
                        .|||||.::|:|||:|.:.:||..||||||:.:|||.|.||:.|.|.||.:|.
  Rat   114 ------------IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINV 166

  Fly   454 DKTLKMIFRQLCGQSCNGACPEVERVMLADGC-RISDKGLQLLTRRCPELTHLQLQTCVDITNQA 517
            |:.||::.|:|| |.....|..:|.|::: || |::|:||..:.:.||||..|::..|.:|:|:|
  Rat   167 DRALKVLTRRLC-QDTPNVCLMLETVIVS-GCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEA 229

  Fly   518 LVEALTKCSNLQHLDVTGCSQVSSIS----PNPHMEP--PRRLLLQYLDLTDCMAIDDMGLKIVV 576
            :.:.::.|.||:||||:|||:|:.||    .:..:.|  .:::.::|||:|||..::|.||..:.
  Rat   230 VFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIA 294

  Fly   577 KNCPQLVYLYLRRCIQVTDAGLKFVPSFCVSLKELSVSDCLNITDFGLYELAKLGAALRYLSVAK 641
            .:|.||.:||||||:::||.||:::..:|.|:||||||||..::||||.|:|||.:.|||||:|.
  Rat   295 AHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAH 359

  Fly   642 CERVSDAGLKVIARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGKCD-VSDAGLRALA 705
            |.|::|.|::.:|:.|.|||||||||||.::|..:..||::|.:|::||||||. |||.||.:||
  Rat   360 CGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLA 424

  Fly   706 ESCPNLKKLSLRSCDMITDRGVQCIAYYCRGLQQLNIQDCPVSIEGYRAVKKYCKRCIIEHTNPG 770
            .:|.|||:|||:||:.||.:|:|.:|..|..||.||:|||.||:|..|.||::||||:||||||.
  Rat   425 LNCFNLKRLSLKSCESITGQGLQIVAANCFDLQMLNVQDCEVSVEALRFVKRHCKRCVIEHTNPA 489

  Fly   771 F 771
            |
  Rat   490 F 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689 25/45 (56%)
leucine-rich repeat 441..460 CDD:275381 9/18 (50%)
AMN1 <451..595 CDD:187754 58/150 (39%)
leucine-rich repeat 476..501 CDD:275381 9/25 (36%)
leucine-rich repeat 502..521 CDD:275381 6/18 (33%)
leucine-rich repeat 528..555 CDD:275381 12/32 (38%)
leucine-rich repeat 556..581 CDD:275381 10/24 (42%)
AMN1 577..746 CDD:187754 93/169 (55%)
leucine-rich repeat 582..607 CDD:275381 12/24 (50%)
leucine-rich repeat 608..633 CDD:275381 16/24 (67%)
leucine-rich repeat 634..659 CDD:275381 12/24 (50%)
leucine-rich repeat 660..685 CDD:275381 14/24 (58%)
leucine-rich repeat 686..710 CDD:275381 15/24 (63%)
leucine-rich repeat 711..735 CDD:275381 12/23 (52%)
leucine-rich repeat 737..761 CDD:275381 14/23 (61%)
Fbxl7NP_001102015.1 F-box-like 114..160 CDD:289689 17/45 (38%)
leucine-rich repeat 129..151 CDD:275381 10/21 (48%)
leucine-rich repeat 154..187 CDD:275381 18/32 (56%)
AMN1 <185..366 CDD:187754 80/187 (43%)
leucine-rich repeat 188..213 CDD:275381 7/24 (29%)
leucine-rich repeat 214..234 CDD:275381 9/20 (45%)
leucine-rich repeat 240..273 CDD:275381 16/36 (44%)
leucine-rich repeat 274..299 CDD:275381 7/26 (27%)
AMN1 297..464 CDD:187754 89/167 (53%)
leucine-rich repeat 300..325 CDD:275381 12/24 (50%)
leucine-rich repeat 326..351 CDD:275381 12/24 (50%)
leucine-rich repeat 352..377 CDD:275381 14/24 (58%)
leucine-rich repeat 378..403 CDD:275381 14/24 (58%)
leucine-rich repeat 404..429 CDD:275381 13/25 (52%)
leucine-rich repeat 430..453 CDD:275381 13/22 (59%)
leucine-rich repeat 456..480 CDD:275381 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I6979
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69121
Inparanoid 1 1.050 396 1.000 Inparanoid score I1896
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 1 1.000 - - FOG0006053
OrthoInspector 1 1.000 - - oto98032
orthoMCL 1 0.900 - - OOG6_107386
Panther 1 1.100 - - LDO PTHR13318
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4348
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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