DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbxl7 and fbxl6

DIOPT Version :10

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001296447.1 Gene:fbxl6 / 323163 ZFINID:ZDB-GENE-060810-162 Length:564 Species:Danio rerio


Alignment Length:441 Identity:102/441 - (23%)
Similarity:162/441 - (36%) Gaps:133/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 FDR----LPDEAVVRIFSWL---DSCE--LCNVARVCRRFEHLAWRPILWKVISL--------RG 448
            ||.    ||.|.:|:||.:.   |...  ||.|.||||.:...|..||||:.:|:        :.
Zfish   141 FDHWGQSLPLEILVKIFQFAVFQDGAVPLLCRVGRVCRLWNGAASSPILWRSVSIGYCWIEPGKS 205

  Fly   449 EHLNGDKTLK---------MIFR----QLCG---------QSCNGACPEVERVMLADGCRISDKG 491
            :....::.:|         .:|:    .||.         |..:.:|..:..:.|:....:::|.
Zfish   206 QLPGTEQKIKNTVDWLAENRLFQLREFSLCHWKKNVDYVIQKVSQSCLSLHSLKLSYCTGMTEKA 270

  Fly   492 LQLLTRRCPELTHLQLQTC---VD---------------------ITNQALVEALTK--CSNLQH 530
            .|.|...|..|..:.:|..   ||                     ..:..|:.||:|  |..|:.
Zfish   271 FQNLGADCQSLEDINVQHSEINVDGLVSFLEAYGNQIKKIYFTHSTKSDKLLSALSKGCCPELRL 335

  Fly   531 LDVT-----GCSQVSSISPNPHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVKNC--PQLVYLYLR 588
            |::.     |.||:........:..|:   ||...|.:..|:..|...|....|  |.|..|   
Zfish   336 LEINTKLDGGYSQLPICIQGLQIGCPK---LQTFRLMNVTAVPKMIRNIPSSTCGFPMLEEL--- 394

  Fly   589 RCIQ------VTDAGLKFVPSFCVSLKELSVSDCLNITDFGLYELAKLGAALRYLSVAKCERV-- 645
             ||.      :||..|..|.....:|:.|.:.....||..|||.|             .|||:  
Zfish   395 -CIATSFHSFMTDNDLNNVLHGSPNLRVLDLRGGSRITPTGLYAL-------------PCERLEC 445

  Fly   646 --------------SDAGLKVIARR-CYKLRYLNARGCEAVSDDSITV----LARS--CPRLRAL 689
                          |..|:.::|:: ...||.|:... :..|::.:.:    ||.|  ....|:|
Zfish   446 FYWGLYFNSNTMVASKKGIHMLAQKWSNTLRELDLAN-QPFSEEDLEIAMGHLAHSVGVEFFRSL 509

  Fly   690 DIGKCDVSDAGLRALAESCPNLKKLSLRSCDMITDRGVQCIAYYCRGLQQL 740
            ::....::.:.||.|....|.||.|:|.||           .|..|||::|
Zfish   510 NLSGTKITSSALRLLINQAPALKYLNLSSC-----------RYLPRGLKRL 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 leucine-rich repeat 502..521 CDD:275381 5/42 (12%)
leucine-rich repeat 528..555 CDD:275381 6/31 (19%)
leucine-rich repeat 556..581 CDD:275381 7/26 (27%)
AMN1 577..746 CDD:187754 48/195 (25%)
leucine-rich repeat 582..607 CDD:275381 8/30 (27%)
leucine-rich repeat 608..633 CDD:275381 8/24 (33%)
leucine-rich repeat 634..659 CDD:275381 6/41 (15%)
leucine-rich repeat 660..685 CDD:275381 7/30 (23%)
leucine-rich repeat 686..710 CDD:275381 5/23 (22%)
leucine-rich repeat 711..735 CDD:275381 7/23 (30%)
leucine-rich repeat 737..761 CDD:275381 2/4 (50%)
dermokine <279..>394 CDD:455732
F-box_SF 401..444 CDD:459239 21/51 (41%)
leucine-rich repeat 441..460 CDD:275381 3/35 (9%)
leucine-rich repeat 476..501 CDD:275381 5/24 (21%)
LRR <483..>640 CDD:443914 43/195 (22%)
fbxl6NP_001296447.1 F-box_FBXL6 145..191 CDD:438891 18/45 (40%)
AMN1 213..396 CDD:187754 36/189 (19%)
leucine-rich repeat 229..254 CDD:275381 4/24 (17%)
leucine-rich repeat 255..280 CDD:275381 5/24 (21%)
leucine-rich repeat 281..306 CDD:275381 4/24 (17%)
leucine-rich repeat 307..334 CDD:275381 5/26 (19%)
leucine-rich repeat 335..362 CDD:275381 4/26 (15%)
AMN1 <391..>542 CDD:187754 41/179 (23%)
leucine-rich repeat 391..418 CDD:275381 8/30 (27%)
leucine-rich repeat 419..438 CDD:275381 7/18 (39%)
leucine-rich repeat 445..473 CDD:275381 3/27 (11%)
leucine-rich repeat 475..505 CDD:275381 7/30 (23%)
leucine-rich repeat 506..530 CDD:275381 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.