DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and Amn1

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001008334.2 Gene:Amn1 / 302032 RGDID:1308119 Length:258 Species:Rattus norvegicus


Alignment Length:359 Identity:73/359 - (20%)
Similarity:128/359 - (35%) Gaps:126/359 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 LPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRP-----ILWKVISLRGEHLNGDKTLKMIFRQ 463
            :|...||.  ..|:.|..|.:..:.|....:.:.|     .|.|::|:||               
  Rat     1 MPSSRVVS--QLLELCLRCLIINISRYISDIKYLPPNIKDRLIKIMSMRG--------------- 48

  Fly   464 LCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCPELTHLQLQTCVDITNQALVEALTKCSNL 528
                                  ||:|..:..:..  ||:..|.|::| :|::.|| :.|.||..|
  Rat    49 ----------------------RITDSNINEVLH--PEVQRLDLRSC-NISDVAL-QHLCKCRKL 87

  Fly   529 QHLDVTGCSQVSSISPNPHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLVYLYLRRCIQV 593
            :.|::..|.:        |..                                          .:
  Rat    88 KALNLKSCRE--------HRN------------------------------------------SI 102

  Fly   594 TDAGLKFVPSFCVSLKELSVSDCLNITDFGLYELAKLGAALRYLSVAKCERVSDAGLKVIARRCY 658
            |..|:|.|.|.|..|.|:|:..|.::|                          |.|:..:|..|.
  Rat   103 TSEGIKAVASSCSDLHEISLKGCCSVT--------------------------DEGVLALALNCQ 141

  Fly   659 KLRYLNARGCEAVSDDSITVLARSCPRLRALDIGKCDVSDAGLRALAES--CPNLKKLSLRSCDM 721
            .|:.::..||.:::|:|:..|.::||.|:.:|.....|||.|:.||...  ...|:::::..|..
  Rat   142 LLKIIDLGGCLSITDESLHALGKNCPFLQCVDFSTTQVSDNGVVALVSGPCAKQLEEINMGYCIN 206

  Fly   722 ITDRGVQCIAYYCRGLQQLNIQDCPVSIEGYRAV 755
            :||:.|:.....|..:..|....||:..:..|.|
  Rat   207 LTDKAVEAALTACPQICILLFHGCPLITDHSREV 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689 11/47 (23%)
leucine-rich repeat 441..460 CDD:275381 4/18 (22%)
AMN1 <451..595 CDD:187754 18/143 (13%)
leucine-rich repeat 476..501 CDD:275381 3/24 (13%)
leucine-rich repeat 502..521 CDD:275381 6/18 (33%)
leucine-rich repeat 528..555 CDD:275381 4/26 (15%)
leucine-rich repeat 556..581 CDD:275381 0/24 (0%)
AMN1 577..746 CDD:187754 38/170 (22%)
leucine-rich repeat 582..607 CDD:275381 6/24 (25%)
leucine-rich repeat 608..633 CDD:275381 5/24 (21%)
leucine-rich repeat 634..659 CDD:275381 4/24 (17%)
leucine-rich repeat 660..685 CDD:275381 7/24 (29%)
leucine-rich repeat 686..710 CDD:275381 8/25 (32%)
leucine-rich repeat 711..735 CDD:275381 5/23 (22%)
leucine-rich repeat 737..761 CDD:275381 5/19 (26%)
Amn1NP_001008334.2 leucine-rich repeat 10..35 CDD:275381 5/24 (21%)
leucine-rich repeat 36..58 CDD:275381 8/58 (14%)
AMN1 37..257 CDD:187754 65/321 (20%)
leucine-rich repeat 63..86 CDD:275381 9/24 (38%)
leucine-rich repeat 87..116 CDD:275381 10/78 (13%)
leucine-rich repeat 117..142 CDD:275381 9/50 (18%)
leucine-rich repeat 143..168 CDD:275381 7/24 (29%)
leucine-rich repeat 169..195 CDD:275381 8/25 (32%)
leucine-rich repeat 196..221 CDD:275381 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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