DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and pof2

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_596079.1 Gene:pof2 / 2540355 PomBaseID:SPBC25B2.11 Length:463 Species:Schizosaccharomyces pombe


Alignment Length:481 Identity:110/481 - (22%)
Similarity:186/481 - (38%) Gaps:148/481 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 RLPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWR----PILWKVISLRGE-HLNG-------DK 455
            |:|:|....|.|:|::.||...:.||     .:||    |.||:.:..:.| .||.       .|
pombe     2 RVPNEVCFNILSYLEADELRCKSTVC-----TSWRNFIIPTLWEKVVFQNEAQLNNFFDTLQYSK 61

  Fly   456 TLKMIFRQLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCPELTHLQLQTCVDITNQALVE 520
            .:...||.|  :..|  |..|.:.       ::||.|.|:| ....::.|.|..|..|:...:.:
pombe    62 DVSYYFRYL--RKLN--CSRVRKF-------LTDKHLMLMT-LATGISRLNLSGCTRISEPLIGK 114

  Fly   521 AL--------TKCSNLQHLDVTGCSQVSSISPNPHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVK 577
            .|        ...||:..|.......:|...||          |:.|::.:|..::|.|:..::|
pombe   115 LLYQNLNLVTINFSNIFSLPANILEYISDNCPN----------LKALNIGNCGLVEDTGMVQIIK 169

  Fly   578 NCPQLVYLYLRRCIQVTDAGLKFVP----------SFC------------VS----LKELS---- 612
            .||.|..|.:..|.::||..|:.:.          |.|            ||    |||||    
pombe   170 RCPYLNRLIIPNCRKLTDVSLQILSEKEDLIELDISGCEGFHNADTLSRLVSRNRGLKELSMDGC 234

  Fly   613 -------------------------------------------------VSDCLNITDFGLYELA 628
                                                             :|.|:.:||..|..|.
pombe   235 TELSHFITFLNLNCELDAMRALSLNNLPDLKDSDIELITCKFSKLNSLFLSKCIGLTDSSLLSLT 299

  Fly   629 KLGAALRYLSVAKCERVSDAGLKVIARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGK 693
            ||..:|..|.:..|..::|.|::.:.:.|..:.|::..||..:||.:::.:|: .|.|:.:.:.|
pombe   300 KLSQSLTTLHLGHCYEITDIGVQCLLKSCKNITYIDFGGCLRLSDIAVSAIAK-LPYLQRVGLVK 363

  Fly   694 C-DVSDAGLRALAES-CPNLKKLSLRSCDMITDRGVQCIAYYCRGLQQLNIQDCPVSIEGYRAVK 756
            | .::|..:..|:.| ..||:::.|..|..:|.:.|..:.|.|:.|:.|       |:.|..:: 
pombe   364 CICLTDLSVILLSGSFSRNLERVHLSYCIGLTAKSVSYLMYNCKTLKHL-------SVTGINSI- 420

  Fly   757 KYC------KRCIIEHTNPG----FC 772
             .|      .|.|.:..||.    ||
pombe   421 -LCTELRSFSRPIPDGINPSQVPVFC 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689 15/47 (32%)
leucine-rich repeat 441..460 CDD:275381 5/26 (19%)
AMN1 <451..595 CDD:187754 36/158 (23%)
leucine-rich repeat 476..501 CDD:275381 6/24 (25%)
leucine-rich repeat 502..521 CDD:275381 4/18 (22%)
leucine-rich repeat 528..555 CDD:275381 4/26 (15%)
leucine-rich repeat 556..581 CDD:275381 7/24 (29%)
AMN1 577..746 CDD:187754 55/249 (22%)
leucine-rich repeat 582..607 CDD:275381 8/46 (17%)
leucine-rich repeat 608..633 CDD:275381 13/77 (17%)
leucine-rich repeat 634..659 CDD:275381 6/24 (25%)
leucine-rich repeat 660..685 CDD:275381 6/24 (25%)
leucine-rich repeat 686..710 CDD:275381 6/25 (24%)
leucine-rich repeat 711..735 CDD:275381 6/23 (26%)
leucine-rich repeat 737..761 CDD:275381 5/29 (17%)
pof2NP_596079.1 F-box-like 2..45 CDD:289689 15/47 (32%)
leucine-rich repeat 96..121 CDD:275381 5/24 (21%)
leucine-rich repeat 122..141 CDD:275381 3/18 (17%)
AMN1 <143..292 CDD:187754 27/158 (17%)
leucine-rich repeat 148..173 CDD:275381 7/24 (29%)
leucine-rich repeat 174..225 CDD:275381 10/50 (20%)
leucine-rich repeat 226..278 CDD:275381 5/51 (10%)
AMN1 <278..428 CDD:187754 40/159 (25%)
leucine-rich repeat 279..304 CDD:275381 8/24 (33%)
leucine-rich repeat 305..330 CDD:275381 6/24 (25%)
leucine-rich repeat 331..355 CDD:275381 6/24 (25%)
leucine-rich repeat 356..382 CDD:275381 6/25 (24%)
leucine-rich repeat 383..408 CDD:275381 7/24 (29%)
leucine-rich repeat 409..427 CDD:275381 5/26 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47209
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2139
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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