DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and Kdm2a

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001001984.2 Gene:Kdm2a / 225876 MGIID:1354736 Length:1161 Species:Mus musculus


Alignment Length:525 Identity:109/525 - (20%)
Similarity:177/525 - (33%) Gaps:147/525 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 GNALRTLPLGAEASQFQNERYYLEDYSSGSGNERLPERLHHPRTSSPSETSGSDRYLLNRSSNSN 299
            |...|:.| ||..|          |:.|.|.:||...                 |.||...:...
Mouse   734 GMVTRSSP-GAGPS----------DHHSASRDERFKR-----------------RQLLRLQATER 770

  Fly   300 HLHSKGQSLSDGLCNLGRFSPSLDQG-YATLVSPSPTGHHSSGGAGNVTNSTTASGAG------I 357
            .:..:.::...|...|.....:..:| |.|:....||.............:.|||.|.      :
Mouse   771 TMVREKENNPSGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRPNPRV 835

  Fly   358 MASSTPTTTPRRGASSNGLG-----------------GGAASAIGPPPWNRKGPFRCGPLFDR-- 403
            :....|...|:.| ...|||                 ||||...|...|.:.|        |.  
Mouse   836 LMQHCPARNPQHG-DEEGLGGEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDG--------DESW 891

  Fly   404 LPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRPILWKVISLRGEHLNGDKTLKMIFRQLCGQS 468
            :..|..:.:|.:|...|||...|||:.:........||..|.|                    ..
Mouse   892 MQREVWMSVFRYLSRKELCECMRVCKTWYKWCCDKRLWTKIDL--------------------SR 936

  Fly   469 CNGACPE-----VERVMLA---DGCRISDKGLQLLTRRCPELTHLQLQTCVDITNQALVEAL--T 523
            |....|:     ::|..::   ....||.|.|..|..|.|.|..|.|..|    :.:.|.||  :
Mouse   937 CKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLLLAGC----SWSAVSALSTS 997

  Fly   524 KCSNLQHLDVTGC-----SQVSSISPNPHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLV 583
            .|..|:.||:...     .|:..:...|..:|.:....:..::||                    
Mouse   998 SCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPGQDNRSKLRNMTD-------------------- 1042

  Fly   584 YLYLRRCIQVTDAGLKFVPSFCVSLKELSVSDCLNITDFGLYELAKLGAALRY----LSVAKCER 644
              :....:.:|||.|:.:......|..|.:|.|.::||.....|..:|::.||    |::|.|.:
Mouse  1043 --FRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAGCNK 1105

  Fly   645 VSDAGLKVIARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGKCDVSDAGLRALAESCP 709
            ::|..| ...||...:..::.|||:.::       .::|...         :||..:.:|  .|.
Mouse  1106 LTDQTL-FFLRRIANVTLIDLRGCKQIT-------RKACEHF---------ISDLSINSL--YCL 1151

  Fly   710 NLKKL 714
            :.:||
Mouse  1152 SDEKL 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689 13/47 (28%)
leucine-rich repeat 441..460 CDD:275381 3/18 (17%)
AMN1 <451..595 CDD:187754 26/158 (16%)
leucine-rich repeat 476..501 CDD:275381 7/27 (26%)
leucine-rich repeat 502..521 CDD:275381 5/18 (28%)
leucine-rich repeat 528..555 CDD:275381 6/31 (19%)
leucine-rich repeat 556..581 CDD:275381 2/24 (8%)
AMN1 577..746 CDD:187754 31/142 (22%)
leucine-rich repeat 582..607 CDD:275381 4/24 (17%)
leucine-rich repeat 608..633 CDD:275381 8/24 (33%)
leucine-rich repeat 634..659 CDD:275381 9/28 (32%)
leucine-rich repeat 660..685 CDD:275381 4/24 (17%)
leucine-rich repeat 686..710 CDD:275381 4/23 (17%)
leucine-rich repeat 711..735 CDD:275381 2/4 (50%)
leucine-rich repeat 737..761 CDD:275381
Kdm2aNP_001001984.2 cupin_like 199..299 CDD:389752
JHD 304..>339 CDD:375347
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..445
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..557
zf-CXXC <576..609 CDD:366873
PHD_KDM2A 619..675 CDD:277113
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 705..789 16/82 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 840..886 12/46 (26%)
F-box-like 895..933 CDD:372399 11/37 (30%)
leucine-rich repeat 929..953 CDD:275381 6/43 (14%)
AMN1 931..1137 CDD:187754 52/259 (20%)
leucine-rich repeat 954..977 CDD:275381 6/22 (27%)
LRR 1 960..981 8/20 (40%)
leucine-rich repeat 978..1001 CDD:275381 8/26 (31%)
LRR 2 983..1009 9/29 (31%)
leucine-rich repeat 1002..1039 CDD:275381 6/36 (17%)
leucine-rich repeat 1040..1064 CDD:275381 6/45 (13%)
LRR 3 1047..1072 6/24 (25%)
leucine-rich repeat 1065..1094 CDD:275381 9/28 (32%)
LRR 4 1073..1102 8/28 (29%)
leucine-rich repeat 1095..1119 CDD:275381 7/24 (29%)
LRR 5 1103..1127 5/24 (21%)
leucine-rich repeat 1120..1139 CDD:275381 4/25 (16%)
LRR 6 1128..1155 6/44 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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