DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and gadr-3

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_498378.2 Gene:gadr-3 / 185933 WormBaseID:WBGene00018561 Length:710 Species:Caenorhabditis elegans


Alignment Length:255 Identity:57/255 - (22%)
Similarity:93/255 - (36%) Gaps:69/255 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 GPLFDRLPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRPILWKVISLRGEHLNGDKTLKMIFR 462
            |..:..|.|:..:.||..|.:. |.|..|  |...:|          .::|.|....|..|.|  
 Worm    97 GYYYRDLIDDNTIDIFELLKAI-LNNETR--RNLHYL----------DIKGSHAFSKKWTKNI-- 146

  Fly   463 QLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCPELTHLQLQTCVDITNQALVEALTKCSN 527
                    |....|.|.::..|..:.....|.|....|.||:|.:..    ||...:..::...|
 Worm   147 --------GTILPVLRSLIICGRHLQSDDFQQLCESIPNLTYLDISE----TNVPNISGISSLKN 199

  Fly   528 LQHLDVTGCSQVSSISPNPHMEPPRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLVYLYLRRCIQ 592
            |:.|          |..:..:|    ...|::||.:.     .||:|:  :..:.:|.:..:.|.
 Worm   200 LESL----------IMRSVELE----CFEQFVDLFNL-----TGLRIL--DVSRSMYKHDTKIIN 243

  Fly   593 VTDAGLKFVPSFCVSLKELSVSDC-------------LNITDFGLYELAKLGAALRYLSV 639
                  ::|.|..| ||||...:|             ||..| .|.::|.:...:|.||:
 Worm   244 ------QYVQSNKV-LKELRFLECSGTDINKNLLEQILNSHD-NLQQVAAINCHIRSLSL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689 10/45 (22%)
leucine-rich repeat 441..460 CDD:275381 4/18 (22%)
AMN1 <451..595 CDD:187754 28/143 (20%)
leucine-rich repeat 476..501 CDD:275381 5/24 (21%)
leucine-rich repeat 502..521 CDD:275381 5/18 (28%)
leucine-rich repeat 528..555 CDD:275381 4/26 (15%)
leucine-rich repeat 556..581 CDD:275381 6/24 (25%)
AMN1 577..746 CDD:187754 18/76 (24%)
leucine-rich repeat 582..607 CDD:275381 4/24 (17%)
leucine-rich repeat 608..633 CDD:275381 10/37 (27%)
leucine-rich repeat 634..659 CDD:275381 3/6 (50%)
leucine-rich repeat 660..685 CDD:275381
leucine-rich repeat 686..710 CDD:275381
leucine-rich repeat 711..735 CDD:275381
leucine-rich repeat 737..761 CDD:275381
gadr-3NP_498378.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162680
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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