DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbxl7 and K02A6.3

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001024745.1 Gene:K02A6.3 / 181077 WormBaseID:WBGene00019294 Length:483 Species:Caenorhabditis elegans


Alignment Length:283 Identity:57/283 - (20%)
Similarity:99/283 - (34%) Gaps:82/283 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 HLNGDKTLKMIFRQLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCPELTHLQLQT----- 509
            :|:|.|:|.::..||.....:                  |....||.:...:||:|.|..     
 Worm   170 YLHGLKSLSLVDLQLTHDEAD------------------DFLSTLLEKFYEKLTYLSLLNVTLYP 216

  Fly   510 -------CVDITNQALV-------EALTKCSNLQHLDVTGCSQVSSISPNPH-MEPPRRLLLQYL 559
                   |.....:.||       :.|:..:.|:||:.....||::   .|: :.||........
 Worm   217 KPLLQVGCFLKLRKLLVSPQMLSTDTLSAIACLEHLETLSIVQVTA---TPYSLFPPTSSATDSF 278

  Fly   560 DLTD---------CMAIDDMGLKIVVKNCPQL-VYLYLR---RCIQVTDAGLKFVPSFCVSLK-- 609
            ...|         |....||.:|   :|..:. |:|.||   :...:...|   .|.:.:.::  
 Worm   279 VFQDEKSSQSTDICRNAWDMFVK---QNMDRTRVWLILRGKPKMSLIIQPG---APIYGIKMENS 337

  Fly   610 --ELSVSDCLNITDFGLYELAKLGAALRYLSVAKCERVS---------DAGLKVIARRCYKLRYL 663
              :|::.....|.::       .||.||:......||:.         |:.|..|..||..|..|
 Worm   338 AGQLTMELAEQIANY-------YGATLRHFIQCGLERMKRGKKMEERVDSALIEIVSRCPNLERL 395

  Fly   664 NARGCEAVSDDSITVLARSCPRL 686
            ..|  |.:|..:..:|:....|:
 Worm   396 ACR--ERMSYGTAVILSVYAERI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689
leucine-rich repeat 441..460 CDD:275381 4/9 (44%)
AMN1 <451..595 CDD:187754 35/176 (20%)
leucine-rich repeat 476..501 CDD:275381 3/24 (13%)
leucine-rich repeat 502..521 CDD:275381 7/37 (19%)
leucine-rich repeat 528..555 CDD:275381 8/27 (30%)
leucine-rich repeat 556..581 CDD:275381 6/33 (18%)
AMN1 577..746 CDD:187754 27/127 (21%)
leucine-rich repeat 582..607 CDD:275381 6/28 (21%)
leucine-rich repeat 608..633 CDD:275381 3/28 (11%)
leucine-rich repeat 634..659 CDD:275381 9/33 (27%)
leucine-rich repeat 660..685 CDD:275381 6/24 (25%)
leucine-rich repeat 686..710 CDD:275381 0/1 (0%)
leucine-rich repeat 711..735 CDD:275381
leucine-rich repeat 737..761 CDD:275381
K02A6.3NP_001024745.1 FBOX 10..50 CDD:197608
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.