DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl7 and C48D1.1

DIOPT Version :9

Sequence 1:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001040928.2 Gene:C48D1.1 / 178271 WormBaseID:WBGene00008177 Length:632 Species:Caenorhabditis elegans


Alignment Length:304 Identity:66/304 - (21%)
Similarity:106/304 - (34%) Gaps:81/304 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 PELTHLQLQTCVDITNQALVEALTKCSNLQHLDVTGCS--QVSSISPNPHMEPPRRLLLQYLDLT 562
            |.||||.:.. |.|......:.....|||:.||::|.:  .::.||        |...|:.|.|.
 Worm   148 PSLTHLTMSD-VHINEDDFYQLFGNFSNLRSLDISGTNILNIAGIS--------RLKQLEVLALR 203

  Fly   563 DCMAIDDMGLKIVVKNCPQLVYLYLRRCIQVTDAGL---------KFVPSF--C-VSLKELSVSD 615
            |          ..:....:|..|:..:.::|.|...         ..|..|  | :.|.||...|
 Worm   204 D----------FSIATYTELKDLFNLKHLRVLDVSQTRFNLHSRNNIVEQFTECKMELPELRFMD 258

  Fly   616 CL------NITDFGLYELAKLGAALRYLSVAKCERVSDAGLKVIARRCYKLRYLNARGCEAVSDD 674
            |.      :|.:..|.....|......::.|:..:.:|            :|.||.    |....
 Worm   259 CTRTSLSGDILECLLKTQRNLQLVTTIMTEAETSQYND------------VRVLNT----AYFHK 307

  Fly   675 SITVLARSCPRLRALDIGKCDVSDAGLRALAESC--PNLKKLSLRSC-----------DMI--TD 724
            |:..|.......:..|.|.|      ::|:..|.  .||:.|::.||           |.|  |.
 Worm   308 SVQALVYCLTARKEFDSGYC------MKAIRISISEDNLQNLNIPSCIKTIVKSMQTFDSISVTQ 366

  Fly   725 RGVQCIAYYCRGL---QQLNIQDCPVSIEGYRAVKKYCKRCIIE 765
            .|::|:..:  |:   .||......:.:|...:.....||.|.|
 Worm   367 NGLKCLIIF--GMLYSNQLCSNGVTLLVEALMSFVYLYKRMISE 408

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Fbxl7NP_650512.1 F-box-like 401..447 CDD:289689
leucine-rich repeat 441..460 CDD:275381
AMN1 <451..595 CDD:187754 23/96 (24%)