DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and HB1

DIOPT Version :9

Sequence 1:NP_001287343.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_179204.1 Gene:HB1 / 816103 AraportID:AT2G16060 Length:160 Species:Arabidopsis thaliana


Alignment Length:144 Identity:30/144 - (20%)
Similarity:57/144 - (39%) Gaps:8/144 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RD--VPLEELSGNARFRAHAGRI 65
            ::..|:.|:|.:......:.|..:..:.|...|:..:.|.| ||  :|.|:   |.:.:.||..:
plant    12 EQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQ---NPKLKPHAMSV 73

  Fly    66 IRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSKESYNQLKGVILDVLTAAC--SLDESQA 128
            ..:..||...|.:.|.:...:....::..||....|..|.:...|..:|:.:..|.  .......
plant    74 FVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEAVPEMWSPEMK 138

  Fly   129 ATWAKLVDHVYGII 142
            ..|.:..||:...|
plant   139 VAWGQAYDHLVAAI 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_001287343.1 Mb_like 9..142 CDD:271266 28/137 (20%)
HB1NP_179204.1 class1_nsHb-like 9..157 CDD:381291 30/144 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3378
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1379813at2759
OrthoFinder 1 1.000 - - FOG0001809
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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