DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment glob1 and cygb2

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001019395.2 Gene:cygb2 / 554176 ZFINID:ZDB-GENE-060920-1 Length:179 Species:Danio rerio


Alignment Length:153 Identity:47/153 - (30%)
Similarity:74/153 - (48%) Gaps:12/153 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKF-PFRDV--PLEELSGNARFRAHAGRIIRVF 69
            :||.||....|:..|.|..||.:||..|||..:.| .|:|:  | ||:..:::.|.||.|::...
Zfish    26 IIKDTWARVYASCEDVGVTILIRFFVNFPSAKQYFSQFQDMEDP-EEMEKSSQLRKHARRVMNAI 89

  Fly    70 DESIQVLGQDGDLEKLDEIWTKIAVSH-IPRTVSKESYNQLKGVILDVLT---AACSLDESQAAT 130
            :..::.|   .|.||:..:...:..:| ....|....:..|.||||::|.   ..|...|.| .:
Zfish    90 NTVVENL---HDPEKVSSVLVLVGKAHAFKYKVEPIYFKILSGVILEILAEEFGECFTPEVQ-TS 150

  Fly   131 WAKLVDHVYGIIFKAIDDDGNAK 153
            |:||:..:|..|..|..:.|..|
Zfish   151 WSKLMAALYWHITGAYTEVGWVK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 43/139 (31%)
cygb2NP_001019395.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Cygb 19..171 CDD:271275 45/149 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.