DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and Hbq1b

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001029153.1 Gene:Hbq1b / 544763 MGIID:3613460 Length:142 Species:Mus musculus


Alignment Length:140 Identity:29/140 - (20%)
Similarity:49/140 - (35%) Gaps:23/140 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLEELSGNARFRAHAGRII 66
            :.|:..|:...|:...:.........|.:.|..|||....||..|:    ..|:::.:|||.::.
Mouse     4 SQDDQWLVLALWKKMGSNVGIYATEALERTFVAFPSTKTYFPHLDL----RPGSSQVKAHAQKVA 64

  Fly    67 RVFDESIQVLGQ-DGDLEKLDEIWT-KIAVS-----------------HIPRTVSKESYNQLKGV 112
            .....:.|.|.. ...|..|.::.. |:.|.                 |.|...|.|.:..|...
Mouse    65 DALTLATQHLDDLPASLSALSDLHAHKLCVDPANFQFFSHCLLVTLARHYPGDFSPEMHASLDKF 129

  Fly   113 ILDVLTAACS 122
            :..|.:|..|
Mouse   130 LGHVTSALVS 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 27/133 (20%)
Hbq1bNP_001029153.1 Hb-alpha-like 4..142 CDD:381263 29/140 (21%)

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