DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and xgb

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001012261.2 Gene:xgb / 497122 ZFINID:ZDB-GENE-050125-1 Length:200 Species:Danio rerio


Alignment Length:164 Identity:37/164 - (22%)
Similarity:74/164 - (45%) Gaps:20/164 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEK-FPFRDV-PLEELSGNARFRAHAG 63
            :.::.::|||::|.:........|..:..:.|...|...:. |.|||| .||.|..:...|||..
Zfish    28 LTANHIRLIKESWRLIQEDIAKVGIIMFVRLFETHPECKDVFFLFRDVEDLERLRTSRELRAHGL 92

  Fly    64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSKESYN--------QLKGVILDVLTAA 120
            |::...::|:..|.|   ||:|:.:..::..||.......:.|.        .::.::.|..|. 
Zfish    93 RVMSFIEKSVARLDQ---LERLETLALELGKSHYRYNAPPKYYGYVGAEFICAVRPILKDRWTP- 153

  Fly   121 CSLDESQAATWAKLVDHVYGIIFKA-IDDDGNAK 153
             .|:|:    |..|..:|..|:.:. ::::.|.:
Zfish   154 -ELEEA----WKTLFQYVTSIMREGFLEEERNKR 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 34/142 (24%)
xgbNP_001012261.2 GbX 28..173 CDD:271287 36/153 (24%)

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