DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and hbd

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001005089.1 Gene:hbd / 448665 XenbaseID:XB-GENE-5844531 Length:147 Species:Xenopus tropicalis


Alignment Length:145 Identity:30/145 - (20%)
Similarity:56/145 - (38%) Gaps:27/145 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSDEVQLIKKTWEIPVATPTDSGAAIL--------TQ-FFNRFPSNLEKFPFRDVPLEELSGNA 56
            :::||...|...|: .|....|...|:.        || :|:.| .||..       :..:||||
 Frog     4 LSADEKSAINAVWQ-KVDIEKDGHEALTRLLVVYPWTQRYFSSF-GNLSN-------VTAISGNA 59

  Fly    57 RFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT-VSKESYNQLKGVILDVLTA- 119
            :...|..:::...||:|.      .::.:....:.::..|.... |..|::.:|..|:..|:.. 
 Frog    60 KVHGHGKKVLSAVDEAIH------HIDDIKHFLSALSKKHAQELHVDPENFKRLADVLAIVVAGK 118

  Fly   120 -ACSLDESQAATWAK 133
             ..:......|.|.|
 Frog   119 LGTAFTPQVQAAWEK 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 28/137 (20%)
hbdNP_001005089.1 Hb-beta-like 8..146 CDD:381262 29/141 (21%)

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