DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and mb

DIOPT Version :9

Sequence 1:NP_001287343.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001349318.1 Gene:mb / 393558 ZFINID:ZDB-GENE-040426-1430 Length:147 Species:Danio rerio


Alignment Length:148 Identity:34/148 - (22%)
Similarity:62/148 - (41%) Gaps:14/148 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFP-FRDVPLEELSGNARFRAHAGRIIRVFDE 71
            |:.|.|....|....:|..:|.:.|..:|..|:.|| |..:...:|:|:....||...:::...|
Zfish     6 LVLKCWGAVEADYAANGGEVLNRLFKEYPDTLKLFPKFSGISQGDLAGSPAVAAHGATVLKKLGE 70

  Fly    72 SIQVLGQDGDLEKLDEIWTKIAVSHIP-RTVSKESYNQLKGVILDVLTAACSLDESQAATWAKLV 135
            .::..|....|.|      .:|.:|.. ..|:..::..:..|::.|:.....||.:......:::
Zfish    71 LLKAKGDHAALLK------PLANTHANIHKVALNNFRLITEVLVKVMAEKAGLDAAGQGALRRVM 129

  Fly   136 DHVYGIIFKAIDDDGNAK 153
            |.|.|      |.||..|
Zfish   130 DAVIG------DIDGYYK 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_001287343.1 Mb_like 9..142 CDD:271266 29/134 (22%)
mbNP_001349318.1 Globin_like 2..147 CDD:328729 34/148 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586893
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3378
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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