DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and HBB

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_000509.1 Gene:HBB / 3043 HGNCID:4827 Length:147 Species:Homo sapiens


Alignment Length:125 Identity:26/125 - (20%)
Similarity:46/125 - (36%) Gaps:36/125 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSDEV-------QLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLEELSGNARF 58
            :|.|||       .|:...|               ||.|      .|.|.....| :.:.||.:.
Human    19 VNVDEVGGEALGRLLVVYPW---------------TQRF------FESFGDLSTP-DAVMGNPKV 61

  Fly    59 RAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT-VSKESYNQLKGVILDVL 117
            :||..:::..|.:.:      ..|:.|...:..::..|..:. |..|::..|..|::.||
Human    62 KAHGKKVLGAFSDGL------AHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVL 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 21/110 (19%)
HBBNP_000509.1 Hb-beta-like 8..146 CDD:381262 26/125 (21%)

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