DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and Hbe1

DIOPT Version :9

Sequence 1:NP_001287343.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001008890.1 Gene:Hbe1 / 293267 RGDID:1305115 Length:147 Species:Rattus norvegicus


Alignment Length:146 Identity:38/146 - (26%)
Similarity:61/146 - (41%) Gaps:29/146 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDEVQLIKKTWEIPVATPTDSGAAI---------LTQFFNRFPSNLEKFPFRDVPLEELSGNARF 58
            ::|..||...|. .|......|.|:         ..:||:.| .||..       ...:.||.|.
  Rat     6 AEEKSLINGLWS-KVNVEEVGGEALGRLLVVYPWTQRFFDSF-GNLSS-------ASAIMGNPRV 61

  Fly    59 RAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT-VSKESYNQLKGVILDVLTAACS 122
            :||..:::..|.|:|:      :|:.|.....|::..|..:. |..|::..|..|::.||.:...
  Rat    62 KAHGKKVLTAFGETIK------NLDNLKSALAKLSELHCDKLHVDPENFKLLGNVLVIVLASHFG 120

  Fly   123 LD---ESQAATWAKLV 135
            .:   |.||| |.|||
  Rat   121 NEFTAEVQAA-WQKLV 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_001287343.1 Mb_like 9..142 CDD:271266 36/140 (26%)
Hbe1NP_001008890.1 Hb-beta_like 7..146 CDD:271276 38/145 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345928
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3378
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 50 1.000 Inparanoid score I5376
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.790

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