DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and Hba-a1

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_037228.1 Gene:Hba-a1 / 25632 RGDID:2782 Length:142 Species:Rattus norvegicus


Alignment Length:65 Identity:16/65 - (24%)
Similarity:28/65 - (43%) Gaps:4/65 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLEELSGNARFRAHAGRI 65
            :::|:...||..|........:.|...|.:.|..||:....|...||.    .|:|:.:||..::
  Rat     3 LSADDKTNIKNCWGKIGGHGGEYGEEALQRMFAAFPTTKTYFSHIDVS----PGSAQVKAHGKKV 63

  Fly    66  65
              Rat    64  63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 15/57 (26%)
Hba-a1NP_037228.1 Hb-alpha-like 3..142 CDD:381263 16/65 (25%)

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