DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and glb-31

DIOPT Version :9

Sequence 1:NP_001287343.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_493944.1 Gene:glb-31 / 190362 WormBaseID:WBGene00021972 Length:169 Species:Caenorhabditis elegans


Alignment Length:131 Identity:23/131 - (17%)
Similarity:57/131 - (43%) Gaps:18/131 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ILTQFFNRFPSNLEKFPFRDVPLEELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTK 91
            |:..:|.|...::::  .|.|.::.::||.::.......|...:|.|:......:.:..:.:..:
 Worm     3 IILAYFRRPKLDIDR--VRSVWMDHINGNDQYFQEVIHRICKRNEGIRCAMLAPNAQHAESVAEE 65

  Fly    92 -IAVSHIPRTVSKESYNQL--KGVILDV--LTAAC----------SLDESQAATWAKLVDHVYGI 141
             ..:|:|...:| :.::||  ..|::|.  |..||          |..:.:.:.|.:....:.|:
 Worm    66 DFVLSNIADRIS-QFFHQLVEDDVLMDTVELKKACYDLGRQHSSYSKQQFKMSYWEEFTLTMMGV 129

  Fly   142 I 142
            :
 Worm   130 L 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_001287343.1 Mb_like 9..142 CDD:271266 23/129 (18%)
glb-31NP_493944.1 Mb_like 18..156 CDD:271266 20/114 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3378
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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