DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment glob1 and glb-18

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001129775.1 Gene:glb-18 / 172485 WormBaseID:WBGene00009917 Length:242 Species:Caenorhabditis elegans


Alignment Length:148 Identity:30/148 - (20%)
Similarity:59/148 - (39%) Gaps:21/148 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAGRI 65
            |..|.:|:::||........:.|:||....|:..|:..:.||| .....:|...:..||:.|.:.
 Worm    75 NVYEKELLRRTWSDEFDNLYELGSAIYCYIFDHNPNCKQLFPFISKYQGDEWKESKEFRSQALKF 139

  Fly    66 IRVFDESIQVLGQDGDLEKLDEIWTKIAVSHI---PRTVSKESYNQLKGVI-------LDVLTAA 120
            ::..   .||:.....:|:.:.....:...|:   .|....|.::..:..:       |.::|  
 Worm   140 VQTL---AQVVKNIYHMERTESFLYMVGQKHVKFADRGFKHEYWDIFQDAMEFALEHRLSIMT-- 199

  Fly   121 CSLDESQ----AATWAKL 134
             .||::|    ...|..|
 Worm   200 -DLDDNQKRDAVTVWRTL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 27/141 (19%)
glb-18NP_001129775.1 Mb-like 82..224 CDD:381254 27/141 (19%)

Return to query results.
Submit another query.