DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and Hbb-b1

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001265090.1 Gene:Hbb-b1 / 15129 MGIID:96021 Length:147 Species:Mus musculus


Alignment Length:132 Identity:30/132 - (22%)
Similarity:52/132 - (39%) Gaps:26/132 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKF-PFRDV-PLEELSGNARFRAHAG 63
            :|||||                 |...|.:....:|.....| .|.|: ....:.|||:.:||..
Mouse    19 VNSDEV-----------------GGEALGRLLVVYPWTQRYFDSFGDLSSASAIMGNAKVKAHGK 66

  Fly    64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT-VSKESYNQLKGVILDVLTAACSLDESQ 127
            ::|..|::.:      ..|:.|...:..::..|..:. |..|::..|..:|:.||......|.:.
Mouse    67 KVITAFNDGL------NHLDSLKGTFASLSELHCDKLHVDPENFRLLGNMIVIVLGHHLGKDFTP 125

  Fly   128 AA 129
            ||
Mouse   126 AA 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 25/124 (20%)
Hbb-b1NP_001265090.1 Hb-beta-like 8..146 CDD:381262 30/132 (23%)

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