DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment glob1 and Cygb

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_084482.1 Gene:Cygb / 114886 MGIID:2149481 Length:190 Species:Mus musculus


Alignment Length:157 Identity:46/157 - (29%)
Similarity:76/157 - (48%) Gaps:12/157 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKF-PFRDV--PLEELSGNARFRAHA 62
            ::..|.:.::.||....|...|.|.|||.:||..|||..:.| .||.:  || |:..:.:.|.||
Mouse    19 LSEAERKAVQATWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFRHMEDPL-EMERSPQLRKHA 82

  Fly    63 GRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSH-IPRTVSKESYNQLKGVILDVLTAACSLD-- 124
            .|::...:..::.|   .|.:|:..:...:..:| :...|....:..|.||||:|:....:.|  
Mouse    83 CRVMGALNTVVENL---HDPDKVSSVLALVGKAHALKHKVEPMYFKILSGVILEVIAEEFANDFP 144

  Fly   125 -ESQAATWAKLVDHVYGIIFKAIDDDG 150
             |:|.| ||||...:|..:..|..:.|
Mouse   145 VETQKA-WAKLRGLIYSHVTAAYKEVG 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 43/139 (31%)
CygbNP_084482.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 0/1 (0%)
Cygb 22..171 CDD:271275 46/154 (30%)

Return to query results.
Submit another query.