DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob1 and Hbq1b

DIOPT Version :10

Sequence 1:NP_524369.1 Gene:glob1 / 41930 FlyBaseID:FBgn0027657 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_017453102.1 Gene:Hbq1b / 100361053 RGDID:2320907 Length:180 Species:Rattus norvegicus


Alignment Length:112 Identity:25/112 - (22%)
Similarity:40/112 - (35%) Gaps:23/112 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FNRFPSNLEKFPFRDVPLEELSGNARFRAHAGRIIRVFDESIQVLGQ-DGDLEKLDEIWT-KIAV 94
            |..|||....||..|:.    .|:::.:|||.::......:...|.. .|.|..|.::.. ::.|
  Rat    72 FLAFPSTKTYFPHLDLK----PGSSQVKAHAQKVADALTLAAHHLDDLPGSLSALSDLHAHELRV 132

  Fly    95 S-----------------HIPRTVSKESYNQLKGVILDVLTAACSLD 124
            .                 |.|...|.|.:..|...:..|.:|..|.|
  Rat   133 DPANFQFFSHCLLVTLARHYPGDFSPEMHASLDKFLGHVTSALVSKD 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob1NP_524369.1 Mb-like 9..142 CDD:381254 25/112 (22%)
Hbq1bXP_017453102.1 Hb-alpha-like 69..180 CDD:381263 25/112 (22%)

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