DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14877 and Gyc76C

DIOPT Version :10

Sequence 1:NP_650507.1 Gene:CG14877 / 41929 FlyBaseID:FBgn0038380 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001163473.1 Gene:Gyc76C / 8674026 FlyBaseID:FBgn0266136 Length:1525 Species:Drosophila melanogaster


Alignment Length:229 Identity:56/229 - (24%)
Similarity:86/229 - (37%) Gaps:54/229 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLVLLLVGLVFGPKDCVATCREEPARDCEAICDANGRN-CTIRALVLLPDDNMYQASLPRVLPIL 65
            ||:||.|.:                |||     :|.|. .|:..|..|..|...:..|.....:.
  Fly     8 LLLLLSVAV----------------RDC-----SNHRTVLTVGYLTALTGDLKTRQGLAISGALT 51

  Fly    66 KVAEQQIRSKSLIPS-HIDFEWLAHDTKCDASLGVIKAMDGIIKQCAQVIFGP--VCDYSLAAVS 127
            ...::..:..:|:|: ::|..|  :|||.|..|.. ||:..:|......||||  .| |..|.||
  Fly    52 MALDEVNKDPNLLPNVYLDLRW--NDTKGDTVLAT-KAITEMICDGIATIFGPEGPC-YVEAIVS 112

  Fly   128 RITKYFNSQGTPLISVGGSTYDFEQKKTDCNDEFYMLLRTGMLSFETISELTINVMKRHNWSHSI 192
            :      |:..|:||...:.|......|        ..||.....:.:..| :.:::.:.|:...
  Fly   113 Q------SRNIPMISYKCAEYRASAIPT--------FARTEPPDTQVVKSL-LALLRYYAWNKFS 162

  Fly   193 FYYERDGQRSVAGMHTCFLMMKSLGKQMRNENMT 226
            ..|| |....||.:         |..|....|||
  Fly   163 ILYE-DVWSPVADL---------LKDQATKRNMT 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14877NP_650507.1 Periplasmic_Binding_Protein_type1 45..>251 CDD:471960 45/185 (24%)
Gyc76CNP_001163473.1 PBP1_SAP_GC-like 26..445 CDD:380593 46/190 (24%)
PK_GC-A_B 543..827 CDD:270944
HNOBA <833..881 CDD:462234
CYCc 860..1052 CDD:214485
Blue background indicates that the domain is not in the aligned region.

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