DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14877 and Gyc88E

DIOPT Version :9

Sequence 1:NP_650507.1 Gene:CG14877 / 41929 FlyBaseID:FBgn0038380 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001036711.1 Gene:Gyc88E / 41825 FlyBaseID:FBgn0038295 Length:1097 Species:Drosophila melanogaster


Alignment Length:144 Identity:27/144 - (18%)
Similarity:50/144 - (34%) Gaps:44/144 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 YSLAAVSRITKYFNSQGTPLISVGGSTYDFEQKKTDCNDEFYMLLRTGMLSFE-----------T 174
            :.|..|..:|:.|:.|...|:          |.:.....|..:.|:..|:..|           .
  Fly   269 FELVTVDPVTERFDVQNEDLL----------QHEDGSEPEKSLRLKGQMVYMENWRMIMFLGTPV 323

  Fly   175 ISELT--------INVMKRHNWSHSIFYYERDGQRSVAGMHTCFLMMKSLGKQMRNENMTFAQFP 231
            :.:||        ||.:..|::|..:.         :||......:..:|.::.:...      .
  Fly   324 MPDLTSLITTGLYINDLSMHDFSRDLM---------LAGTQQSVELKLALDQEQQKSK------K 373

  Fly   232 LEPNLTNRTEEMRR 245
            ||.::....|||||
  Fly   374 LEESMRLLDEEMRR 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14877NP_650507.1 Periplasmic_Binding_Protein_Type_1 46..>241 CDD:299141 22/138 (16%)
Gyc88ENP_001036711.1 HNOB 2..164 CDD:311572
HNOBA 201..404 CDD:311573 27/144 (19%)
CYCc 383..571 CDD:214485 5/5 (100%)
Herpes_ICP4_C 794..>955 CDD:332854
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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