DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14877 and gcy-21

DIOPT Version :10

Sequence 1:NP_650507.1 Gene:CG14877 / 41929 FlyBaseID:FBgn0038380 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001364740.1 Gene:gcy-21 / 191651 WormBaseID:WBGene00001546 Length:1163 Species:Caenorhabditis elegans


Alignment Length:243 Identity:48/243 - (19%)
Similarity:86/243 - (35%) Gaps:78/243 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EEPARDCEAICDANGRNCTIRALV--------LLPDDNMYQASLPRVLPILKVAEQQIRSKSLIP 79
            ::||:.|...|     |.|:...:        ||.|...|.|....  ..|.:      ..::..
 Worm   335 KKPAKMCPPYC-----NTTVSEKITPRWDRIKLLFDSIQYLADATN--DALNI------GANIYQ 386

  Fly    80 SHIDFEWLAHDTKCDASLGVIKAMDGIIKQCAQVIFGPVC---------------DYSLAAVSRI 129
            |.|.:|:|. ..|.|:..||.:.:||         :|.:.               .|||...:|:
 Worm   387 SDIFYEYLI-SRKIDSVTGVTEFIDG---------YGAIVGSIQIYYHFSSSSHNSYSLFPCARL 441

  Fly   130 TKYFNSQGTPLISV-------GGSTYDFEQKKT------------DC----NDEFYMLLRTGMLS 171
                 :|.:.|.:|       .|.:.||..|..            :|    |:.|.:::..|:..
 Worm   442 -----AQSSLLNTVWSLTDYSEGLSIDFVNKSAPKDTPVCGFYGENCGPPANNTFIIVISVGVAV 501

  Fly   172 FETISELTINVMKRHNWS---HSIFYYERDGQRSVAGMHTCFLMMKSL 216
            ...::.....:.||:.:.   ||:|:. .|..:.:...||..:..:||
 Worm   502 LIGLAIAAAFLYKRYRYERRLHSLFFM-IDRNQIILKKHTNLMSQQSL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14877NP_650507.1 Periplasmic_Binding_Protein_type1 45..>251 CDD:471960 42/221 (19%)
gcy-21NP_001364740.1 Periplasmic_Binding_Protein_type1 58..422 CDD:471960 23/109 (21%)
PK_GC 612..881 CDD:270894
HNOBA <890..938 CDD:462234
Guanylate_cyc 944..1130 CDD:425528
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.