DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31183 and GLR2.5

DIOPT Version :10

Sequence 1:NP_650505.2 Gene:CG31183 / 41927 FlyBaseID:FBgn0051183 Length:1417 Species:Drosophila melanogaster
Sequence 2:NP_001332219.1 Gene:GLR2.5 / 830991 AraportID:AT5G11210 Length:918 Species:Arabidopsis thaliana


Alignment Length:503 Identity:95/503 - (18%)
Similarity:171/503 - (33%) Gaps:150/503 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 EVNAVFGLPCEYVLAP-ISRYADVWQVPVLTTGGNAKEFNK-KSESYSTLTRLKGAQVNNLGNVV 221
            ||.|:.| |...:.|| :....:..:||:::....:...:. :|..:...|....:||    ..:
plant   101 EVVAIIG-PGTSMQAPFLINLGNQSKVPIISFSATSPLLDSLRSPYFIRATHDDSSQV----QAI 160

  Fly   222 RAILNSFNWTRTALIY-QNENAKVKGNSVCFLCLAAIHDTIEE-------HSVYQLGFDTSTWTK 278
            .||:.||.|.....|| .||    .|..:    |..:.|..:|       .|...|.:......|
plant   161 SAIIESFRWREVVPIYVDNE----FGEGI----LPNLVDAFQEINVRIRYRSAISLHYSDDQIKK 217

  Fly   279 ADITRMLKNVAMQSRIVIMCADPQSIRQIMLTAEELNMIDSGEYVFINIELFSRVQYLTSQPWYD 343
                .:.|.:.|.:|:.|:...|....::...|:|::|:..| ||                 |..
plant   218 ----ELYKLMTMPTRVFIVHMLPDLGSRLFSIAKEIDMLSKG-YV-----------------WIV 260

  Fly   344 KND-TDLNNERAQKAYTAMLTVTPKQPNDNEYTRVSNEIKAIAAEKYNYTFSDNEPISAFVTSFF 407
            .|. .||.:...:.:...|..|.    ....|...|.|:..:.| ::...|. .|.::.|....:
plant   261 TNGIADLMSIMGESSLVNMHGVL----GVKTYFAKSKELLHLEA-RWQKRFG-GEELNNFACWAY 319

  Fly   408 DGVLLYANALNE---------SIREDPTM---------LTRPINGTDMVRRMWNRSFTGITGN-- 452
            |.....|.::.|         :.:||.:.         |...::|..::..:...||.|:.|.  
plant   320 DAATALAMSVEEIRHVNMSFNTTKEDTSRDDIGTDLDELGVALSGPKLLDALSTVSFKGVAGRFQ 384

  Fly   453 -------------VTIDANGDRLSAY---------SLLDMNPTTGRFEIVAHFLHNRLEFEANKE 495
                         :.|:.:|:|...:         ||        |.:.|:| ...||     :.
plant   385 LKNGKLEATTFKIINIEESGERTVGFWKSKVGLVKSL--------RVDKVSH-SSRRL-----RP 435

  Fly   496 IHWAGDREEAPPDRPICGYDGALCPDNSLPGYAILSIVLGTMVVVMAVCFFFGYRHYIAEAE--- 557
            |.|.||....|.     |::   .|.|:             ..:.:||....|:.:::...:   
plant   436 IIWPGDTIFVPK-----GWE---FPTNA-------------KKLRIAVPKKDGFNNFVEVTKDEN 479

  Fly   558 -----------------INSMSWKVSLEDVMFRDAAERGLRGSFHSLV 588
                             ::.|.:.||.|.:.| |..:...|||:..:|
plant   480 TNVPTVTGFCIDVFNTVMSQMPYAVSYEYIPF-DTPDGKPRGSYDEMV 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31183NP_650505.2 PBP1_NPR-like 87..493 CDD:380596 74/386 (19%)
PK_GC-A_B 589..883 CDD:270944 95/503 (19%)
HNOBA <890..938 CDD:462234
CYCc 917..1108 CDD:214485
GLR2.5NP_001332219.1 PBP1_GABAb_receptor_plant 38..421 CDD:380645 67/360 (19%)
GluR_Plant 456..806 CDD:270404 13/72 (18%)
Lig_chan 584..838 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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