DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and ATM1

DIOPT Version :10

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_014030.1 Gene:ATM1 / 855347 SGDID:S000004916 Length:690 Species:Saccharomyces cerevisiae


Alignment Length:621 Identity:251/621 - (40%)
Similarity:366/621 - (58%) Gaps:62/621 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 LRTVFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWD------- 289
            |:.:|.|:|||.|..::|.|::.:.||::.:::.:.:|.:.|:.:||:.||     ||       
Yeast    92 LKDLFRYIWPKGNNKVRIRVLIALGLLISAKILNVQVPFFFKQTIDSMNIA-----WDDPTVALP 151

  Fly   290 -----FVLIYVALSFLQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWHLQR 349
                 .:|.|....|      ||: ||..||..::.:|.|...|.:.::.|:||.:|.|.|||.|
Yeast   152 AAIGLTILCYGVARF------GSV-LFGELRNAVFAKVAQNAIRTVSLQTFQHLMKLDLGWHLSR 209

  Fly   350 KTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVAYFVYAFNWWFGLIVFLTMFLYIASTI 414
            :||.:.|.|||||..|:.:|..:||.|.|...::.|......|.|...|..|.|.||.||...||
Yeast   210 QTGGLTRAMDRGTKGISQVLTAMVFHIIPISFEISVVCGILTYQFGASFAAITFSTMLLYSIFTI 274

  Fly   415 AITEWRTKYQRRMNLADNEQRARSVDSLLNFETVKYYGAEHYEVDCYREAILKYQKEEFLSMLTL 479
            ..|.|||.::|..|.|||:..:.::|||:|||.|||:..|.|..|.|..:::.|:..:.....:|
Yeast   275 KTTAWRTHFRRDANKADNKAASVALDSLINFEAVKYFNNEKYLADKYNGSLMNYRDSQIKVSQSL 339

  Fly   480 NMLNTAQNIIL-----------CLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELYMPLNWF 533
            ..||:.||:|.           |.|::.|:            |||||.||.:..:.:|.:|||:.
Yeast   340 AFLNSGQNLIFTTALTAMMYMGCTGVIGGN------------LTVGDLVLINQLVFQLSVPLNFL 392

  Fly   534 GTYYRAIQKNFVDMENMFDLLKEEEEIVDAPGCSPLLTAGG---GIEFSNVTFGYSPEKIVLRNV 595
            |:.||.::::.:|||.:|.|.|.|.:|.:|.  .||:....   .|.|.||||||.|::.:|:|.
Yeast   393 GSVYRDLKQSLIDMETLFKLRKNEVKIKNAE--RPLMLPENVPYDITFENVTFGYHPDRKILKNA 455

  Fly   596 SFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTV 660
            |||:|||...||||.||:|||||::|:|||||.::|.|||:|::||.....:|||.||||||||.
Yeast   456 SFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVIGVVPQDTP 520

  Fly   661 LFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVAIAR 725
            |||:||:.|:::.::.|:||.|......|.:...|...|:.::|.||||||.:|||||||:||||
Yeast   521 LFNDTIWENVKFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEKQRLAIAR 585

  Fly   726 TLLKAPIIVLLDEATSALDTHTERNIQAALARVCAN-----RTTIIVAHRLSTIIHADEILVLQQ 785
            .|||...|:..||||||||||||   ||.|..:..|     ||::.:||||.||..||:|:||..
Yeast   586 VLLKNARIMFFDEATSALDTHTE---QALLRTIRDNFTSGSRTSVYIAHRLRTIADADKIIVLDN 647

  Fly   786 GSIAERGRHEELVLREDGIYADMW--QQQLKNLDAE 819
            |.:.|.|:|.||:.....:|.::|  |:.|.:|:.|
Yeast   648 GRVREEGKHLELLAMPGSLYRELWTIQEDLDHLENE 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049 3/8 (38%)
ATM1 222..821 CDD:444078 251/621 (40%)
ATM1NP_014030.1 ATM1 81..674 CDD:444078 247/610 (40%)

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