DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmt-1 and PGP10

DIOPT Version :10

Sequence 1:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_172538.1 Gene:PGP10 / 837611 AraportID:AT1G10680 Length:1227 Species:Arabidopsis thaliana


Alignment Length:528 Identity:177/528 - (33%)
Similarity:272/528 - (51%) Gaps:81/528 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 LWIRVQQYTTREIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILD 382
            |.:||:|        ::|..:.:..:.|.  .|......::....:|...||..||...:..:|:
plant   733 LTLRVRQ--------KMFSAILRNEIGWF--DKVDNTSSMLASRLESDATLLRTIVVDRSTILLE 787

  Fly   383 LL-VAVAYFVYAF--NWWFGLIVFLTMFLYIASTIAITEWRTKYQRRMNLADNEQRARSVDSLLN 444
            .| :.|..|:.:|  ||...|:|..|..|.|:..|:...:...|...::.|..:....:.:|:.|
plant   788 NLGLVVTAFIISFILNWRLTLVVLATYPLIISGHISEKIFMQGYGGNLSKAYLKANMLAGESISN 852

  Fly   445 FETVKYYGAEHYEVDCYREAILKYQKEEFLSMLTLNMLNTAQNIILCLGLLAGSLLCVYLVVHHQ 509
            ..||..:.||...:|.|.:.:|:..:..|..                 |.:||.|          
plant   853 IRTVVAFCAEEKVLDLYSKELLEPSERSFRR-----------------GQMAGIL---------- 890

  Fly   510 TLTVGDFVLFSTYLMELYMPLNWFGTY--------YRAIQKNFVDM------------------- 547
             ..|..|.:||:|.:.|     |:|:.        :.::.|.|:.:                   
plant   891 -YGVSQFFIFSSYGLAL-----WYGSILMEKGLSSFESVMKTFMVLIVTALVMGEVLALAPDLLK 949

  Fly   548 -----ENMFDLLKEEEEIVDAPGCSPLLTAGGGIEFSNVTFGY--SPEKIVLRNVSFTVPAGKTV 605
                 .::|:||....::|...| ..|....|.||...|.|.|  .|:..:..:.:..||:||::
plant   950 GNQMVVSVFELLDRRTQVVGDTG-EELSNVEGTIELKGVHFSYPSRPDVTIFSDFNLLVPSGKSM 1013

  Fly   606 AIVGPSGAGKSTIMRLLFRFYDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNI 670
            |:||.||:|||:::.|:.||||...|.|:||||:||.::.:|||:.||:|.|:..||..||:.||
plant  1014 ALVGQSGSGKSSVLSLVLRFYDPTAGIIMIDGQDIKKLKLKSLRRHIGLVQQEPALFATTIYENI 1078

  Fly   671 EYAKLGASDEAVYEAARAADIHERILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVL 735
            .|.|.|||:..|.|||:.|:.|..|...||.|.|||||||:::|||::||:||||.:||.|.|:|
plant  1079 LYGKEGASESEVMEAAKLANAHSFISSLPEGYSTKVGERGIQMSGGQRQRIAIARAVLKNPEILL 1143

  Fly   736 LDEATSALDTHTERNIQAALARVCANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLR 800
            |||||||||..:||.:|.||.|:..:|||::||||||||.::|.|.|:|.|.|.|:|.|..||..
plant  1144 LDEATSALDVESERVVQQALDRLMRDRTTVVVAHRLSTIKNSDMISVIQDGKIIEQGSHNILVEN 1208

  Fly   801 EDGIYADM 808
            ::|.|:.:
plant  1209 KNGPYSKL 1216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:465049
ATM1 222..821 CDD:444078 177/528 (34%)
PGP10NP_172538.1 PTZ00265 40..1221 CDD:240339 177/528 (34%)
Blue background indicates that the domain is not in the aligned region.

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